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annotate mothur/tool-data/mothur_aligndb.loc.sample @ 3:6b358d0f17b4 draft

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Update to Mothur version 1.24
author Jim Johnson <jj@umn.edu>
date Wed, 05 Sep 2012 19:49:43 -0500
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1 #This is a sample file distributed with Galaxy that enables tools
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2 #to use a directory of metagenomics files.
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3 #file has this format (white space characters are TAB characters):
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4 #
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5 # Reference Alignments: http://www.mothur.org/wiki/Alignment_database
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6 #
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7 #<dbname> <file_base>
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8 #
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9 #greengenes /project/db/galaxy/mothur/core_set_aligned.imputed.fasta
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10 #silva archaea /project/db/galaxy/mothur/Silva.archaea/silva.archaea.fasta
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11 #silva bacteria /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.fasta
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12 #silva eukarya /project/db/galaxy/mothur/silva.eukarya.fasta
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13 #silva archaea nogap /project/db/galaxy/mothur/Silva.archaea/nogap.archaea.fasta
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14 #silva bacteria nogap /project/db/galaxy/mothur/silva.bacteria/nogap.bacteria.fasta
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15 #silva eukarya nogap /project/db/galaxy/mothur/nogap.eukarya.fasta
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16 #FungiLSU_train_1400bp_8506_mod.fasta /project/db/galaxy/mothur/RDP/FungiLSU_train_1400bp_8506_mod.fasta
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17 #trainset6_032010.rdp.fasta /project/db/galaxy/mothur/RDP/trainset6_032010.rdp.fasta
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18 #trainset7_112011.pds.fasta /project/db/galaxy/mothur/RDP/trainset7_112011.pds.fasta
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19 #trainset7_112011.rdp.fasta /project/db/galaxy/mothur/RDP/trainset7_112011.rdp.fasta