# HG changeset patch
# User Jim Johnson <jj@umn.edu>
# Date 1349891381 18000
# Node ID a3068eb6b6761d75acb2bd7b27d1b5398bfb4a8d
# Parent  61f300dbc6ac8df19c52efa6e467ca0855ef2fe7
Add python to command line to aloow for non-standard location

diff -r 61f300dbc6ac -r a3068eb6b676 metaphlan.xml
--- a/metaphlan.xml	Wed Oct 10 12:35:51 2012 -0500
+++ b/metaphlan.xml	Wed Oct 10 12:49:41 2012 -0500
@@ -4,8 +4,8 @@
     <requirement type="package">bowtie2</requirement>
   </requirements>
   <description>Metagenomic Phylogenetic Analysis</description>
-  <command interpreter="python">
-	  \${METAPHLAN_PATH}/metaphlan.py 
+  <command>
+	  python \${METAPHLAN_PATH}/metaphlan.py 
 	  $input  
 	  --bowtie2db \${METAPHLAN_PATH}/bowtie2db/mpa  
 	  --no_map