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view metaphlan_to_phyloxml.xml @ 6:a3068eb6b676 draft

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Add python to command line to aloow for non-standard location
author Jim Johnson <jj@umn.edu>
date Wed, 10 Oct 2012 12:49:41 -0500
parents 0ec6c5781381
children
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<tool id="meta_to_phylo" name="MetaPhlAn to PhyloXML" version="1.0.0">
 <description>Converter</description>
 <command interpreter="python">
metaphlan_to_phyloxml.py $input $output
 </command>
 <inputs>
  <param name="input" type="data" format="tabular" label="Input MetaPhlAn File"/>
 </inputs>
 <outputs>
    <data format="xml" name="output" label="${tool.name} on ${on_string}" /> 
 </outputs>
 <tests>
 </tests>
 <help>
  MetaPhlAn to PhyloXML Converter
 </help>
</tool>