diff tool_dependencies.xml @ 1:868624c77941 draft

Add tool_dependencies.xml

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Tue Oct 09 15:53:06 2012 -0500
@@ -0,0 +1,22 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <set_environment version="1.0">
+        <environment_variable name="METAPHLAN_BASE" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable>
+    </set_environment>
+    <package name="metaphlan" version="1.7.0">
+        <install version="1.0">
+            <actions>
+                <action type="shell_command">hg clone https://bitbucket.org/nsegata/metaphlan -u 43684e5f6dc5</action>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+These links provide information for the metaphlan package:
+http://huttenhower.sph.harvard.edu/metaphlan
+https://groups.google.com/forum/#!forum/metaphlan-users
+        </readme>
+    </package>
+</tool_dependency>
+