Mercurial > repos > jjohnson > gmap
comparison gmap_build.xml @ 1:74391fc6e3f2 draft
Add package requirement
| author | Jim Johnson <jj@umn.edu> |
|---|---|
| date | Fri, 05 Oct 2012 13:08:43 -0500 |
| parents | 10e3476429b5 |
| children | f6ba0f12cca2 |
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| 0:10e3476429b5 | 1:74391fc6e3f2 |
|---|---|
| 1 <tool id="gmap_build" name="GMAP Build" version="2.0.0"> | 1 <tool id="gmap_build" name="GMAP Build" version="2.0.0"> |
| 2 <description>a database genome index for GMAP and GSNAP</description> | 2 <description>a database genome index for GMAP and GSNAP</description> |
| 3 <requirements> | 3 <requirements> |
| 4 <requirement type="binary">gmap_build</requirement> | 4 <requirement type="package" version="2011-11-30">gmap</requirement> |
| 5 </requirements> | 5 </requirements> |
| 6 <version_string>gmap --version</version_string> | 6 <version_string>gmap --version</version_string> |
| 7 <command interpreter="command"> /bin/bash $shscript 2>1 1> $output </command> | 7 <command interpreter="command"> /bin/bash $shscript 2>1 1> $output </command> |
| 8 <inputs> | 8 <inputs> |
| 9 <!-- Name for this gmapdb --> | 9 <!-- Name for this gmapdb --> |