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annotate test-data/ss.her2.fasta @ 6:4f358603ee12 draft default tip

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Uploaded v3.0.1c with table fix
author peterjc
date Fri, 21 Oct 2016 11:15:09 -0400
parents 14561eb803a5
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
5
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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1 >NM_004448 Homo sapiens v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian) (ERBB2), transcript variant 1, mRNA. 4624 bp, mRNA, linear, PRI 20-DEC-2004
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
peterjc
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2 GGAGGAGGTGGAGGAGGAGGGCTGCTTGAGGAAGTATAAGAATGAAGTTGTGAAGCTGAG
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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3 ATTCCCCTCCATTGGGACCGGAGAAACCAGGGGAGCCCCCCGGGCAGCCGCGCGCCCCTT
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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4 CCCACGGGGCCCTTTACTGCGCCGCGCGCCCGGCCCCCACCCCTCGCAGCACCCCGCGCC
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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5 CCGCGCCCTCCCAGCCGGGTCCAGCCGGAGCCATGGGGCCGGAGCCGCAGTGAGCACCAT
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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6 GGAGCTGGCGGCCTTGTGCCGCTGGGGGCTCCTCCTCGCCCTCTTGCCCCCCGGAGCCGC
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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7 GAGCACCCAAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAGAC
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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8 CCACCTGGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGA
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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9 ACTCACCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGCAGGATATCCAGGAGGTGCA
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10 GGGCTACGTGCTCATCGCTCACAACCAAGTGAGGCAGGTCCCACTGCAGAGGCTGCGGAT
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11 TGTGCGAGGCACCCAGCTCTTTGAGGACAACTATGCCCTGGCCGTGCTAGACAATGGAGA
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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12 CCCGCTGAACAATACCACCCCTGTCACAGGGGCCTCCCCAGGAGGCCTGCGGGAGCTGCA
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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13 GCTTCGAAGCCTCACAGAGATCTTGAAAGGAGGGGTCTTGATCCAGCGGAACCCCCAGCT
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14 CTGCTACCAGGACACGATTTTGTGGAAGGACATCTTCCACAAGAACAACCAGCTGGCTCT
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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15 CACACTGATAGACACCAACCGCTCTCGGGCCTGCCACCCCTGTTCTCCGATGTGTAAGGG
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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16 CTCCCGCTGCTGGGGAGAGAGTTCTGAGGATTGTCAGAGCCTGACGCGCACTGTCTGTGC
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17 CGGTGGCTGTGCCCGCTGCAAGGGGCCACTGCCCACTGACTGCTGCCATGAGCAGTGTGC
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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18 TGCCGGCTGCACGGGCCCCAAGCACTCTGACTGCCTGGCCTGCCTCCACTTCAACCACAG
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19 TGGCATCTGTGAGCTGCACTGCCCAGCCCTGGTCACCTACAACACAGACACGTTTGAGTC
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20 CATGCCCAATCCCGAGGGCCGGTATACATTCGGCGCCAGCTGTGTGACTGCCTGTCCCTA
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21 CAACTACCTTTCTACGGACGTGGGATCCTGCACCCTCGTCTGCCCCCTGCACAACCAAGA
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22 GGTGACAGCAGAGGATGGAACACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGT
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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23 GTGCTATGGTCTGGGCATGGAGCACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATAT
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24 CCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGGCATTTCTGCCGGAGAGCTT
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25 TGATGGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCCAGAGCAGCTCCAAGTGTTTGA
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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26 GACTCTGGAAGAGATCACAGGTTACCTATACATCTCAGCATGGCCGGACAGCCTGCCTGA
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27 CCTCAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACGAATTCTGCACAATGGCGCCTA
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28 CTCGCTGACCCTGCAAGGGCTGGGCATCAGCTGGCTGGGGCTGCGCTCACTGAGGGAACT
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29 GGGCAGTGGACTGGCCCTCATCCACCATAACACCCACCTCTGCTTCGTGCACACGGTGCC
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30 CTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGA
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31 GGACGAGTGTGTGGGCGAGGGCCTGGCCTGCCACCAGCTGTGCGCCCGAGGGCACTGCTG
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32 GGGTCCAGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCCTTCGGGGCCAGGAGTGCGT
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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33 GGAGGAATGCCGAGTACTGCAGGGGCTCCCCAGGGAGTATGTGAATGCCAGGCACTGTTT
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34 GCCGTGCCACCCTGAGTGTCAGCCCCAGAATGGCTCAGTGACCTGTTTTGGACCGGAGGC
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35 TGACCAGTGTGTGGCCTGTGCCCACTATAAGGACCCTCCCTTCTGCGTGGCCCGCTGCCC
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36 CAGCGGTGTGAAACCTGACCTCTCCTACATGCCCATCTGGAAGTTTCCAGATGAGGAGGG
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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37 CGCATGCCAGCCTTGCCCCATCAACTGCACCCACTCCTGTGTGGACCTGGATGACAAGGG
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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38 CTGCCCCGCCGAGCAGAGAGCCAGCCCTCTGACGTCCATCATCTCTGCGGTGGTTGGCAT
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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39 TCTGCTGGTCGTGGTCTTGGGGGTGGTCTTTGGGATCCTCATCAAGCGACGGCAGCAGAA
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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40 GATCCGGAAGTACACGATGCGGAGACTGCTGCAGGAAACGGAGCTGGTGGAGCCGCTGAC
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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41 ACCTAGCGGAGCGATGCCCAACCAGGCGCAGATGCGGATCCTGAAAGAGACGGAGCTGAG
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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42 GAAGGTGAAGGTGCTTGGATCTGGCGCTTTTGGCACAGTCTACAAGGGCATCTGGATCCC
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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43 TGATGGGGAGAATGTGAAAATTCCAGTGGCCATCAAAGTGTTGAGGGAAAACACATCCCC
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
peterjc
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44 CAAAGCCAACAAAGAAATCTTAGACGAAGCATACGTGATGGCTGGTGTGGGCTCCCCATA
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
peterjc
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45 TGTCTCCCGCCTTCTGGGCATCTGCCTGACATCCACGGTGCAGCTGGTGACACAGCTTAT
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
peterjc
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46 GCCCTATGGCTGCCTCTTAGACCATGTCCGGGAAAACCGCGGACGCCTGGGCTCCCAGGA
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
peterjc
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47 CCTGCTGAACTGGTGTATGCAGATTGCCAAGGGGATGAGCTACCTGGAGGATGTGCGGCT
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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48 CGTACACAGGGACTTGGCCGCTCGGAACGTGCTGGTCAAGAGTCCCAACCATGTCAAAAT
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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49 TACAGACTTCGGGCTGGCTCGGCTGCTGGACATTGACGAGACAGAGTACCATGCAGATGG
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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50 GGGCAAGGTGCCCATCAAGTGGATGGCGCTGGAGTCCATTCTCCGCCGGCGGTTCACCCA
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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51 CCAGAGTGATGTGTGGAGTTATGGTGTGACTGTGTGGGAGCTGATGACTTTTGGGGCCAA
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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52 ACCTTACGATGGGATCCCAGCCCGGGAGATCCCTGACCTGCTGGAAAAGGGGGAGCGGCT
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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53 GCCCCAGCCCCCCATCTGCACCATTGATGTCTACATGATCATGGTCAAATGTTGGATGAT
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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54 TGACTCTGAATGTCGGCCAAGATTCCGGGAGTTGGTGTCTGAATTCTCCCGCATGGCCAG
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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55 GGACCCCCAGCGCTTTGTGGTCATCCAGAATGAGGACTTGGGCCCAGCCAGTCCCTTGGA
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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56 CAGCACCTTCTACCGCTCACTGCTGGAGGACGATGACATGGGGGACCTGGTGGATGCTGA
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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57 GGAGTATCTGGTACCCCAGCAGGGCTTCTTCTGTCCAGACCCTGCCCCGGGCGCTGGGGG
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
peterjc
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58 CATGGTCCACCACAGGCACCGCAGCTCATCTACCAGGAGTGGCGGTGGGGACCTGACACT
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
peterjc
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59 AGGGCTGGAGCCCTCTGAAGAGGAGGCCCCCAGGTCTCCACTGGCACCCTCCGAAGGGGC
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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60 TGGCTCCGATGTATTTGATGGTGACCTGGGAATGGGGGCAGCCAAGGGGCTGCAAAGCCT
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
peterjc
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61 CCCCACACATGACCCCAGCCCTCTACAGCGGTACAGTGAGGACCCCACAGTACCCCTGCC
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
peterjc
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62 CTCTGAGACTGATGGCTACGTTGCCCCCCTGACCTGCAGCCCCCAGCCTGAATATGTGAA
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63 CCAGCCAGATGTTCGGCCCCAGCCCCCTTCGCCCCGAGAGGGCCCTCTGCCTGCTGCCCG
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
peterjc
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64 ACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGTCGT
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
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65 CAAAGACGTTTTTGCCTTTGGGGGTGCCGTGGAGAACCCCGAGTACTTGACACCCCAGGG
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66 AGGAGCTGCCCCTCAGCCCCACCCTCCTCCTGCCTTCAGCCCAGCCTTCGACAACCTCTA
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67 TTACTGGGACCAGGACCCACCAGAGCGGGGGGCTCCACCCAGCACCTTCAAAGGGACACC
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peterjc
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68 TACGGCAGAGAACCCAGAGTACCTGGGTCTGGACGTGCCAGTGTGAACCAGAAGGCCAAG
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
peterjc
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69 TCCGCAGAAGCCCTGATGTGTCCTCAGGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCA
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70 AGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCATGCCAGGAACCTGTCCT
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peterjc
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71 AAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGA
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72 AGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
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73 GTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCAGATCCTGGGTACTGAAAGC
14561eb803a5 Uploaded v3.0.1b (still working on this prior to main Tool Shed release)
peterjc
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74 CTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCG
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75 ACCCATTCAGAGACTGTCCCTGAAACCTAGTACTGCCCCCCATGAGGAAGGAACAGCAAT
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76 GGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTTTACTTTTTTTGTT
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77 TTGTTTTTTTAAAGATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCA
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78 AGTGTGGGGGGTCCTTCTCCACACCCACTTTGTCCATTTGCAAATATATTTTGGAAAACA
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79 GCTA