Mercurial > repos > jjohnson > gmap

annotate tool-data/datatypes_conf.xml @ 2:f6ba0f12cca2 draft

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Untested work-in-progress GMAP wrappers v3.0.0, from JJ back in June 2013
author peterjc
date Wed, 28 Sep 2016 10:43:44 -0400
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children 488e9d642566
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1 <?xml version="1.0"?>
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2 <datatypes>
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3 <datatype_files>
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4 <datatype_file name="gmap.py"/>
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5 </datatype_files>
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6 <registration>
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7 <datatype extension="gmapdb" type="galaxy.datatypes.gmap:GmapDB" display_in_upload="False"/>
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8 <datatype extension="gmapsnpindex" type="galaxy.datatypes.gmap:GmapSnpIndex" display_in_upload="False"/>
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9 <datatype extension="iit" type="galaxy.datatypes.gmap:IntervalIndexTree" display_in_upload="True"/>
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10 <datatype extension="splicesites.iit" type="galaxy.datatypes.gmap:SpliceSitesIntervalIndexTree" display_in_upload="True"/>
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11 <datatype extension="introns.iit" type="galaxy.datatypes.gmap:IntronsIntervalIndexTree" display_in_upload="True"/>
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12 <datatype extension="snps.iit" type="galaxy.datatypes.gmap:SNPsIntervalIndexTree" display_in_upload="True"/>
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13 <datatype extension="gmap_annotation" type="galaxy.datatypes.gmap:IntervalAnnotation" display_in_upload="False"/>
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14 <datatype extension="gmap_splicesites" type="galaxy.datatypes.gmap:SpliceSiteAnnotation" display_in_upload="True"/>
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15 <datatype extension="gmap_introns" type="galaxy.datatypes.gmap:IntronAnnotation" display_in_upload="True"/>
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16 <datatype extension="gmap_snps" type="galaxy.datatypes.gmap:SNPAnnotation" display_in_upload="True"/>
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17 </registration>
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18 <sniffers>
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19 <sniffer type="galaxy.datatypes.gmap:IntervalAnnotation"/>
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20 <sniffer type="galaxy.datatypes.gmap:SpliceSiteAnnotation"/>
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21 <sniffer type="galaxy.datatypes.gmap:IntronAnnotation"/>
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22 <sniffer type="galaxy.datatypes.gmap:SNPAnnotation"/>
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23 </sniffers>
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24 </datatypes>