Mercurial > repos > jjohnson > gatk2
log
| age | author | description |
|---|---|---|
| Tue, 19 Feb 2013 20:59:51 -0600 | Jim Johnson | Temporarily use my own copy of samtools until cross dependency support is in release draft |
| Mon, 18 Feb 2013 15:48:46 -0600 | Jim Johnson | Move GATK tool_dependency to a repository dependency, use 2 env vars: GATK2_NUM_THREADS and GATK2_NUM_CPU_THREADS for site threading values draft |
| Mon, 18 Feb 2013 11:17:32 -0600 | Jim Johnson | Use repository dependency for samtools with corrected revision draft |
| Mon, 18 Feb 2013 11:13:47 -0600 | Jim Johnson | Use repository dependency for samtools (from main toolshed) draft |
| Mon, 18 Feb 2013 11:01:18 -0600 | Jim Johnson | Use repository dependency for samtools draft |
| Fri, 28 Dec 2012 14:15:14 -0600 | Jim Johnson | Add BQSR and plot_pdf_file options to base_recalibrator.xml draft |
| Fri, 28 Dec 2012 12:34:05 -0600 | Jim Johnson | Replace covariate DinucCovariate with ContextCovariate draft |