Mercurial > repos > jjohnson > gatk2
log
| age | author | description |
|---|---|---|
| Thu, 28 Feb 2013 15:32:04 -0600 | Jim Johnson | Omit --read_filter param included by default draft |
| Thu, 28 Feb 2013 12:45:44 -0600 | Jim Johnson | unified_genotyper - add sample_poidy param draft |
| Thu, 28 Feb 2013 12:44:55 -0600 | Jim Johnson | variant_recalibrator Omit --read_filter for MalformedReadFilter since it included by default, allows --filter_mismatching_base_and_quals to be set draft |
| Tue, 19 Feb 2013 21:04:33 -0600 | Jim Johnson | Temporarily use my own copy of samtools - correct name draft |
| Tue, 19 Feb 2013 20:59:51 -0600 | Jim Johnson | Temporarily use my own copy of samtools until cross dependency support is in release draft |
| Mon, 18 Feb 2013 15:48:46 -0600 | Jim Johnson | Move GATK tool_dependency to a repository dependency, use 2 env vars: GATK2_NUM_THREADS and GATK2_NUM_CPU_THREADS for site threading values draft |
| Mon, 18 Feb 2013 11:17:32 -0600 | Jim Johnson | Use repository dependency for samtools with corrected revision draft |