Mercurial > repos > jjohnson > gatk2

changeset 8:e5eac3c0ce10 draft

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Update tool_dependencies.xml
author Jim Johnson <jj@umn.edu>
date Tue, 06 Nov 2012 11:41:15 -0600
parents f253357915e0
children 24504f5cac5e
files tool_dependencies.xml
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue Nov 06 11:23:22 2012 -0600
+++ b/tool_dependencies.xml	Tue Nov 06 11:41:15 2012 -0600
@@ -4,12 +4,12 @@
         <install version="1.0">
             <actions>
                 <action type="download_by_url">ftp://ftp.broadinstitute.org/pub/gsa/GenomeAnalysisTK/GenomeAnalysisTKLite-latest.tar.bz2</action>
-                <!-- this expands into GenomeAnalysisTKLite-2.2-2-gd3f5a5e/
+                <!-- this expands into GenomeAnalysisTKLite-2.2-3-g63dddfb/
                      which common_util.py tar_extraction_directory() does not find
-                     so the move file must contain the GenomeAnalysisTKLite-2.2-2-gd3f5a5e dir path
+                     so the move file must contain the GenomeAnalysisTKLite-2.2-3-g63dddfb dir path
                  -->
                 <action type="move_file">
-                    <source>GenomeAnalysisTKLite-2.2-2-gd3f5a5e/GenomeAnalysisTKLite.jar</source>
+                    <source>GenomeAnalysisTKLite-2.2-2-3-g63dddfb/GenomeAnalysisTKLite.jar</source>
                     <destination>$INSTALL_DIR</destination>
                 </action>
                 <action type="shell_command">ln -s GenomeAnalysisTKLite.jar GenomeAnalysisTK.jar</action>