gatk2: revision graph

Replace covariate DinucCovariate with ContextCovariate draft
Fri, 28 Dec 2012 12:34:05 -0600, by Jim Johnson
Remove thread options from base_recalibrator.xml draft
Fri, 28 Dec 2012 12:08:47 -0600, by Jim Johnson
Fix base_recalibrator.xml option: no_standard_covs draft
Fri, 28 Dec 2012 11:50:20 -0600, by Jim Johnson
remove thread options from indel_realigner.xml draft
Fri, 28 Dec 2012 11:21:40 -0600, by Jim Johnson
remove thread options from realigner_target_creator.xml draft
Fri, 28 Dec 2012 11:08:23 -0600, by Jim Johnson
Update tool_dependencies to GATK v 2.3 draft
Thu, 20 Dec 2012 11:01:55 -0600, by Jim Johnson
Many fixes to haplotype_caller draft
Thu, 15 Nov 2012 10:18:55 -0600, by Jim Johnson
base_recalibrator out_puts gatk_report draft
Thu, 15 Nov 2012 10:18:27 -0600, by Jim Johnson
Update tool_dependecies to GenomeAnalysisTKLite-2.2-8-g99996f2.tar.bz2 draft
Thu, 15 Nov 2012 10:17:22 -0600, by Jim Johnson
Remove unneeded params draft
Thu, 08 Nov 2012 13:09:56 -0600, by Jim Johnson
Fix output filters draft
Thu, 08 Nov 2012 11:50:01 -0600, by Jim Johnson
Add help to HaplotypeCaller draft
Thu, 08 Nov 2012 10:55:32 -0600, by Jim Johnson
Add HaplotypeCaller draft
Thu, 08 Nov 2012 10:38:18 -0600, by Jim Johnson
Comment out site options from reduce_reads.xml draft
Tue, 06 Nov 2012 12:07:36 -0600, by Jim Johnson

Mercurial > repos > jjohnson > gatk2