Mercurial > repos > jjohnson > gatk2

diff tool_data_table_conf.xml.sample @ 0:74c05070a3f8 draft

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author jjohnson
date Thu, 01 Nov 2012 13:53:22 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_data_table_conf.xml.sample	Thu Nov 01 13:53:22 2012 -0400
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+<tables>
+    <!-- Location of Picard dict files valid for GATK -->
+    <table name="gatk2_picard_indexes" comment_char="#">
+        <columns>value, dbkey, name, path</columns>
+        <file path="tool-data/gatk2_sorted_picard_index.loc" />
+    </table>
+    <!-- Available of GATK references -->
+    <table name="gatk2_annotations" comment_char="#">
+        <columns>value, name, gatk_value, tools_valid_for</columns>
+        <file path="tool-data/gatk2_annotations.txt" />
+    </table>
+</tables>