Mercurial > repos > jjohnson > gatk2

comparison print_reads.xml @ 6:6dd67e9fd0e0 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
ReduceReads added
author Jim Johnson <jj@umn.edu>
date Tue, 06 Nov 2012 10:32:16 -0600
parents 74c05070a3f8
children 7533db8dfb5b
comparison
equal deleted inserted replaced
5:0ed800373b59 6:6dd67e9fd0e0
119 ${analysis_param_type.do_not_write_original_quals} 119 ${analysis_param_type.do_not_write_original_quals}
120 ' 120 '
121 #end if 121 #end if
122 </command> 122 </command>
123 <inputs> 123 <inputs>
124 <param name="input_recal" type="data" format="csv" label="Covariates table recalibration file" help="-BQSR,--BQSR &amp;lt;recal_file&amp;gt;" /> 124 <param name="input_recal" type="data" format="csv" optional="true" label="Covariates table recalibration file" help="-BQSR,--BQSR &amp;lt;recal_file&amp;gt;" />
125 <conditional name="reference_source"> 125 <conditional name="reference_source">
126 <param name="reference_source_selector" type="select" label="Choose the source for the reference list"> 126 <param name="reference_source_selector" type="select" label="Choose the source for the reference list">
127 <option value="cached">Locally cached</option> 127 <option value="cached">Locally cached</option>
128 <option value="history">History</option> 128 <option value="history">History</option>
129 </param> 129 </param>