annotate tool_data_table_conf.xml.sample @ 39:fab099dde911
draft default tip
VariantFiltration should not have -nt option since it does not implemnt TreeReducible
| author |
Jim Johnson <jj@umn.edu> |
| date |
Tue, 05 Mar 2013 11:15:13 -0600 |
| parents |
74c05070a3f8 |
| children |
|
| rev |
line source |
|
0
|
1 <tables>
|
|
|
2 <!-- Location of Picard dict files valid for GATK -->
|
|
|
3 <table name="gatk2_picard_indexes" comment_char="#">
|
|
|
4 <columns>value, dbkey, name, path</columns>
|
|
|
5 <file path="tool-data/gatk2_sorted_picard_index.loc" />
|
|
|
6 </table>
|
|
|
7 <!-- Available of GATK references -->
|
|
|
8 <table name="gatk2_annotations" comment_char="#">
|
|
|
9 <columns>value, name, gatk_value, tools_valid_for</columns>
|
|
|
10 <file path="tool-data/gatk2_annotations.txt" />
|
|
|
11 </table>
|
|
|
12 </tables>
|
