Mercurial > repos > jjohnson > ensembl_cdna_translate

comparison ensembl_cdna_translate.xml @ 2:b7f2f5e3390c draft

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Uploaded
author jjohnson
date Wed, 29 Nov 2017 16:33:02 -0500
parents a8218b11216f
children d1055a763560
comparison
equal deleted inserted replaced
1:0f70b1b92161 2:b7f2f5e3390c
31 #end if 31 #end if
32 #end if 32 #end if
33 #if str($output_choice).find('translation') >= 0: 33 #if str($output_choice).find('translation') >= 0:
34 | python '$__tool_directory__/ensembl_cdna_translate.py' -i '-' 34 | python '$__tool_directory__/ensembl_cdna_translate.py' -i '-'
35 #if $input and str($output_choice).find('transcript_bed') >= 0: 35 #if $input and str($output_choice).find('transcript_bed') >= 0:
36 --transcripts '$transcript_bed 36 --transcripts '$transcript_bed'
37 #end if 37 #end if
38 #if str($output_choice).find('translation_bed') >= 0: 38 #if str($output_choice).find('translation_bed') >= 0:
39 --bed '$translation_bed' 39 --bed '$translation_bed'
40 #end if 40 #end if
41 #if str($output_choice).find('translation_fasta') >= 0: 41 #if str($output_choice).find('translation_fasta') >= 0: