view data_manager_conf.xml @ 2:a74d61dbd155 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper commit f431329cd1c7f8a6014207a4ebfd9ffaa67e5497-dirty

<?xml version="1.0"?>
<data_managers>
  <data_manager tool_file="data_manager/data_manager_eggnog.xml" id="data_manager_eggnog" >
    <data_table name="eggnog_mapper_db">  <!-- Defines a Data Table to be modified. -->
      <output> <!-- Handle the output of the Data Manager Tool -->
        <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
        <column name="name" />  <!-- columns that are going to be specified by the Data Manager Tool -->
        <column name="path" output_ref="out_file" >
          <move type="directory" relativize_symlinks="True">
            <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${value}</target>
          </move>
          <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${value}</value_translation>
          <value_translation type="function">abspath</value_translation>
        </column>
      </output>
    </data_table>
    <data_table name="eggnog_mapper_hmm_dbs">  <!-- Defines a Data Table to be modified. -->
      <output> <!-- Handle the output of the Data Manager Tool -->
        <column name="key" /> <!-- columns that are going to be specified by the Data Manager Tool -->
        <column name="db_version" /> <!-- columns that are going to be specified by the Data Manager Tool -->
        <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
        <column name="name" />  <!-- columns that are going to be specified by the Data Manager Tool -->
        <column name="path" /> <!-- columns that are going to be specified by the Data Manager Tool -->
      </output>
    </data_table>
  </data_manager>
</data_managers>