Mercurial > repos > jjohnson > defuse
diff README @ 18:547d8db4673e
Update create_reference_dataset for non human genome builds
author | Jim Johnson <jj@umn.edu> |
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date | Sat, 15 Jun 2013 14:36:47 -0500 |
parents | 06675bd664ee |
children | 225750bf3770 |
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--- a/README Wed Jun 12 21:03:18 2013 -0500 +++ b/README Sat Jun 15 14:36:47 2013 -0500 @@ -5,7 +5,7 @@ Manual: -http://sourceforge.net/apps/mediawiki/defuse/index.php?title=DeFuse_Version_0.6.0 +http://sourceforge.net/apps/mediawiki/defuse/index.php?title=DeFuse_Version_0.6.1 The included tool_dependencies.xml will download and install the defuse code. It will set the environment variable: "DEFUSE_PATH" to the location of the defuse install. @@ -34,6 +34,9 @@ These datasets should be referenced in the tool-data/defuse.loc file. +The create_reference_dataset will run the create_reference_dataset.pl script to generate deFuse genome reference data in a galaxy dataset. +This should me made available in the future as a Galaxy DataManager. + Galaxy will try to auto-install dependencies: