Mercurial > repos > jjohnson > defuse
comparison data_manager_conf.xml @ 24:2cbb285cc54e
Fix typo in data_manager_conf.xml
| author | Jim Johnson <jj@umn.edu> |
|---|---|
| date | Wed, 07 Aug 2013 12:00:42 -0500 |
| parents | 68494d6aabeb |
| children |
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| 23:e8fc5de0578b | 24:2cbb285cc54e |
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| 6 <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool --> | 6 <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool --> |
| 7 <column name="dbkey" /> | 7 <column name="dbkey" /> |
| 8 <column name="name" /> | 8 <column name="name" /> |
| 9 <column name="path" output_ref="out_file" > <!-- The value of this column will be modified based upon data in "out_file". example value "phiX.fa" --> | 9 <column name="path" output_ref="out_file" > <!-- The value of this column will be modified based upon data in "out_file". example value "phiX.fa" --> |
| 10 <move type="directory"> <!-- Moving a file from the extra files path of "out_file" --> | 10 <move type="directory"> <!-- Moving a file from the extra files path of "out_file" --> |
| 11 !-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base --> | 11 <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base --> |
| 12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${value}/defuse</target> <!-- Target Location to store the file, directories are created as needed --> | 12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${value}/defuse</target> <!-- Target Location to store the file, directories are created as needed --> |
| 13 </move> | 13 </move> |
| 14 <!-- datamanager_create_reference.py should have copied the defuse config file to the working directory. | 14 <!-- datamanager_create_reference.py should have copied the defuse config file to the working directory. |
| 15 so if we put the ${dbkey}.config path in this column, defuse.xml can set the data_directory to this this directory. | 15 so if we put the ${dbkey}.config path in this column, defuse.xml can set the data_directory to this this directory. |
| 16 --> | 16 --> |
