comparison data_manager_conf.xml @ 24:2cbb285cc54e

Fix typo in data_manager_conf.xml
author Jim Johnson <jj@umn.edu>
date Wed, 07 Aug 2013 12:00:42 -0500
parents 68494d6aabeb
children
comparison
equal deleted inserted replaced
23:e8fc5de0578b 24:2cbb285cc54e
6 <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool --> 6 <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
7 <column name="dbkey" /> 7 <column name="dbkey" />
8 <column name="name" /> 8 <column name="name" />
9 <column name="path" output_ref="out_file" > <!-- The value of this column will be modified based upon data in "out_file". example value "phiX.fa" --> 9 <column name="path" output_ref="out_file" > <!-- The value of this column will be modified based upon data in "out_file". example value "phiX.fa" -->
10 <move type="directory"> <!-- Moving a file from the extra files path of "out_file" --> 10 <move type="directory"> <!-- Moving a file from the extra files path of "out_file" -->
11 !-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base --> 11 <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base -->
12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${value}/defuse</target> <!-- Target Location to store the file, directories are created as needed --> 12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${value}/defuse</target> <!-- Target Location to store the file, directories are created as needed -->
13 </move> 13 </move>
14 <!-- datamanager_create_reference.py should have copied the defuse config file to the working directory. 14 <!-- datamanager_create_reference.py should have copied the defuse config file to the working directory.
15 so if we put the ${dbkey}.config path in this column, defuse.xml can set the data_directory to this this directory. 15 so if we put the ${dbkey}.config path in this column, defuse.xml can set the data_directory to this this directory.
16 --> 16 -->