Mercurial > repos > jjohnson > data_manager_snpeff
comparison data_manager/data_manager_snpEff_databases.xml @ 6:a329eda0cdff draft default tip
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author | jjohnson |
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date | Wed, 09 Dec 2015 13:49:55 -0500 |
parents | 6a378d0f4856 |
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5:78bcf4ac437c | 6:a329eda0cdff |
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1 <tool id="data_manager_snpeff_databases" name="SnpEff Databases" version="4.0" tool_type="manage_data"> | 1 <tool id="data_manager_snpeff_databases" name="SnpEff Databases" version="4.1.0" tool_type="manage_data"> |
2 <description>Read the list of available snpEff databases</description> | 2 <description>Read the list of available snpEff databases</description> |
3 <requirements> | 3 <requirements> |
4 <requirement type="package" version="4.0">snpEff</requirement> | 4 <requirement type="package" version="4.1">snpEff</requirement> |
5 </requirements> | 5 </requirements> |
6 <command interpreter="python"> | 6 <command interpreter="python"> |
7 data_manager_snpEff_databases.py --jar_path \$SNPEFF_JAR_PATH/snpEff.jar "$out_file" | 7 data_manager_snpEff_databases.py --jar_path \$SNPEFF_JAR_PATH/snpEff.jar "$out_file" |
8 </command> | 8 </command> |
9 <inputs> | 9 <inputs> |