comparison tool_data_table_conf.xml.sample @ 5:78bcf4ac437c

Use tool_data_table with key and version columns added to allow for multiple versions in a .loc file
author Jim Johnson <jj@umn.edu>
date Tue, 13 Jan 2015 12:54:20 -0600
parents c6769a700e55
children
comparison
equal deleted inserted replaced
4:6a378d0f4856 5:78bcf4ac437c
1 <tables> 1 <tables>
2 <table name="snpeff4_databases" comment_char="#"> 2 <table name="snpeffv_genomedb" comment_char="#">
3 <columns>value, name</columns> 3 <columns>key, version, value, name, path</columns>
4 <file path="tool-data/snpeff4_databases.loc" /> 4 <file path="tool-data/snpeffv_genomedb.loc" />
5 </table> 5 </table>
6 <table name="snpeff4_genomedb" comment_char="#"> 6 <table name="snpeffv_regulationdb" comment_char="#">
7 <columns>value, name, path</columns> 7 <columns>key, version, genome, value, name</columns>
8 <file path="tool-data/snpeff4_genomedb.loc" /> 8 <file path="tool-data/snpeffv_regulationdb.loc" />
9 </table> 9 </table>
10 <table name="snpeff4_regulationdb" comment_char="#"> 10 <table name="snpeffv_annotations" comment_char="#">
11 <columns>genome, value, name</columns> 11 <columns>key, version, genome, value, name</columns>
12 <file path="tool-data/snpeff4_regulationdb.loc" /> 12 <file path="tool-data/snpeffv_annotations.loc" />
13 </table> 13 </table>
14 <table name="snpeff4_annotations" comment_char="#"> 14 <table name="snpeffv_databases" comment_char="#">
15 <columns>genome, value, name</columns> 15 <columns>key, version, value, name</columns>
16 <file path="tool-data/snpeff4_annotations.loc" /> 16 <file path="tool-data/snpeffv_databases.loc" />
17 </table> 17 </table>
18 </tables> 18 </tables>
19 19