Mercurial > repos > jjohnson > data_manager_snpeff

annotate tool-data/snpeffv_genomedb.loc.sample @ 6:a329eda0cdff draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author jjohnson
date Wed, 09 Dec 2015 13:49:55 -0500
parents 78bcf4ac437c
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
bc50aa3b328a Uploaded
jjohnson
parents:
diff changeset
1 ## Downloaded Databases for SnpEff
bc50aa3b328a Uploaded
jjohnson
parents:
diff changeset
2 ## These are from the list on: http://snpeff.sourceforge.net/download.html
bc50aa3b328a Uploaded
jjohnson
parents:
diff changeset
3 ## the Description field in this sample is "Genome : Version"
5
78bcf4ac437c Use tool_data_table with key and version columns added to allow for multiple versions in a .loc file
Jim Johnson <jj@umn.edu>
parents: 3
diff changeset
4 #Key snpeff_version Version Description data_dir path
78bcf4ac437c Use tool_data_table with key and version columns added to allow for multiple versions in a .loc file
Jim Johnson <jj@umn.edu>
parents: 3
diff changeset
5 #SnpEff4.0_GRCh37.74 SnpEff4.0 GRCh37.74 Homo sapiens : GRCh37.74 /home/galaxy/snpEff/v4_0/data
78bcf4ac437c Use tool_data_table with key and version columns added to allow for multiple versions in a .loc file
Jim Johnson <jj@umn.edu>
parents: 3
diff changeset
6 #SnpEff4.1_GRCh38.76 SnpEff4.1 GRCh38.76 Homo sapiens : GRCh38.76 /home/galaxy/snpEff/v4_1/data