Mercurial > repos > jjohnson > data_manager_eggnog_mapper
diff data_manager_conf.xml @ 0:6abbdf623176 draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper/eggnog_mapper_data_manager commit c4fb2c42cd1f2ce8748a2d949238eea70635f11b-dirty
| author | jjohnson |
|---|---|
| date | Fri, 08 Nov 2019 13:08:30 -0500 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/data_manager_conf.xml Fri Nov 08 13:08:30 2019 -0500 @@ -0,0 +1,27 @@ +<?xml version="1.0"?> +<data_managers> + <data_manager tool_file="data_manager/data_manager_eggnog.xml" id="data_manager_eggnog" > + <data_table name="eggnog_mapper_db"> <!-- Defines a Data Table to be modified. --> + <output> <!-- Handle the output of the Data Manager Tool --> + <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool --> + <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool --> + <column name="path" output_ref="out_file" > + <move type="directory" relativize_symlinks="True"> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">eggnog_data/${value}</target> + </move> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/eggnog_data/${value}</value_translation> + <value_translation type="function">abspath</value_translation> + </column> + </output> + </data_table> + <data_table name="eggnog_mapper_hmm_dbs"> <!-- Defines a Data Table to be modified. --> + <output> <!-- Handle the output of the Data Manager Tool --> + <column name="key" /> <!-- columns that are going to be specified by the Data Manager Tool --> + <column name="db_version" /> <!-- columns that are going to be specified by the Data Manager Tool --> + <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool --> + <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool --> + <column name="path" /> <!-- columns that are going to be specified by the Data Manager Tool --> + </output> + </data_table> + </data_manager> +</data_managers>