diff cuffdiff_mds_plot.xml @ 3:728b0aa0df6e

Add cuffdiff_mds_plot for MultiDimensionalScaling plot for read_group_tracking

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/cuffdiff_mds_plot.xml	Mon Oct 08 16:10:13 2012 -0500
@@ -0,0 +1,20 @@
+<tool id="cuffdiff_mds_plot" name="Cuffdiff MDS Plot" version="1.0">
+  <description>multidimensional scaling (MDS) plot from cuffdiff read_group_tracking</description>
+  <command interpreter="perl">
+    cuffdiff_mds_plot.pl $input data.tmp $plot
+  </command>
+  <inputs>
+    <param format="tabular" name="input" type="data" label="A cuffdiff2 tracking file"
+           help="any of the *.read_group_tracking files produced by cuffdiff2"/>
+  </inputs>
+  <outputs>
+    <data format="png" name="plot" label="${tool.name} on ${on_string}"/>
+  </outputs>
+  <tests>
+    <test>
+    </test>
+  </tests>
+  <help>
+    Generates a multidimensional scaling (MDS) plot of a read_group_tracking output file from cuffdiff2.
+  </help>
+</tool>