# HG changeset patch
# User Jim Johnson <jj@umn.edu>
# Date 1347565610 18000
# Node ID 3961e84d622512c8ff2b7fef02e978cf3ac2908a
# Parent  f0c20796d33a0a7f17c424752758182213f0460f
Add install PREFIX to make command in tool_dependencies.xml

diff -r f0c20796d33a -r 3961e84d6225 tool_dependencies.xml
--- a/tool_dependencies.xml	Tue Sep 11 08:55:27 2012 -0500
+++ b/tool_dependencies.xml	Thu Sep 13 14:46:50 2012 -0500
@@ -4,9 +4,10 @@
         <install version="1.0">
             <actions>
                 <action type="download_by_url">http://cdhit.googlecode.com/files/cd-hit-v4.6.1-2012-08-27.tgz</action>
-                <action type="shell_command">make openmp=yes</action>
+                <action type="shell_command">mkdir -p $INSTALL_DIR/bin/</action>
+                <action type="shell_command">make openmp=yes PREFIX=$INSTALL_DIR/bin/</action>
                 <action type="set_environment">
-                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                 </action>
             </actions>
         </install>