Mercurial > repos > jjohnson > cdhit
comparison tool_dependencies.xml @ 10:211ca88ce047
tool_dependencies.xml
| author | Jim Johnson <jj@umn.edu> |
|---|---|
| date | Thu, 13 Sep 2012 20:15:09 -0500 |
| parents | 55e57243b131 |
| children |
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| 9:55e57243b131 | 10:211ca88ce047 |
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| 4 <install version="1.0"> | 4 <install version="1.0"> |
| 5 <actions> | 5 <actions> |
| 6 <action type="download_by_url">http://cdhit.googlecode.com/files/cd-hit-v4.6.1-2012-08-27.tgz</action> | 6 <action type="download_by_url">http://cdhit.googlecode.com/files/cd-hit-v4.6.1-2012-08-27.tgz</action> |
| 7 <action type="shell_command">mkdir -p $INSTALL_DIR/bin/</action> | 7 <action type="shell_command">mkdir -p $INSTALL_DIR/bin/</action> |
| 8 <action type="shell_command">pwd</action> | 8 <action type="shell_command">pwd</action> |
| 9 <action type="shell_command">make openmp=yes</action> | |
| 9 <action type="shell_command">ls</action> | 10 <action type="shell_command">ls</action> |
| 10 <action type="shell_command">cd cd-hit-v4.6.1-2012-08-27</action> | |
| 11 <action type="shell_command">make openmp=yes</action> | |
| 12 <action type="shell_command">make PREFIX=$INSTALL_DIR/bin/ install</action> | 11 <action type="shell_command">make PREFIX=$INSTALL_DIR/bin/ install</action> |
| 13 <action type="set_environment"> | 12 <action type="set_environment"> |
| 14 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> | 13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> |
| 15 </action> | 14 </action> |
| 16 </actions> | 15 </actions> |