Mercurial > repos > jjohnson > bcftools_stats

diff bcftools_stats.xml @ 1:d541f5c15870 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
author jjohnson
date Sun, 26 Jun 2016 15:44:28 -0400
parents b2f7a15398b4
children
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--- a/bcftools_stats.xml	Sat Jun 25 20:53:11 2016 -0400
+++ b/bcftools_stats.xml	Sun Jun 26 15:44:28 2016 -0400
@@ -105,7 +105,6 @@
     <tests>
         <test>
             <param name="input_files" ftype="vcf" value="stats.b.vcf,stats.a.vcf" />
-            <param name="samples" value="-" />
             <output name="output_file">
                 <assert_contents>
                     <has_text_matching expression="SN\t0\tnumber of samples:\t3"/>
@@ -115,12 +114,11 @@
         </test>
         <test>
             <param name="input_files" ftype="vcf" value="mpileup.vcf" />
-            <param name="samples" value="-" />
             <output name="output_file">
                 <assert_contents>
                     <has_text_matching expression="SN\t0\tnumber of samples:\t3"/>
                     <has_text_matching expression="SN\t0\tnumber of records:\t4103"/>
-                    <has_text_matching expression="SN\t0\tA>C\t16"/>
+                    <has_text_matching expression="ST\t0\tA>C\t16"/>
                 </assert_contents>
             </output>
         </test>