Mercurial > repos > jjohnson > bcftools_plugin_missing2ref
comparison test-data/consensus.vcf @ 0:ff65d6e0809b draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
| author | jjohnson |
|---|---|
| date | Sat, 25 Jun 2016 20:51:04 -0400 |
| parents | |
| children |
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| -1:000000000000 | 0:ff65d6e0809b |
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| 1 ##fileformat=VCFv4.2 | |
| 2 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> | |
| 3 ##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record"> | |
| 4 ##ALT=<ID=DEL,Description="Deletion"> | |
| 5 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT NA001 | |
| 6 1 5 . C a . PASS . GT 0/1 | |
| 7 1 5 . C t . PASS . GT 0/1 | |
| 8 1 7 . T a . PASS . GT . | |
| 9 1 10 . G a . PASS . GT 0/1 | |
| 10 1 12 . GACA ga . PASS . GT 0/1 | |
| 11 1 16 . T taaa . PASS . GT 1/1 | |
| 12 1 19 . A c . PASS . GT 0/1 | |
| 13 1 61 . C a . PASS . GT 0/1 | |
| 14 2 61 . AGAG aa . PASS . GT 0/1 | |
| 15 2 119 . AAA t . PASS . GT 0/1 | |
| 16 2 179 . G gacgtacgt . PASS . GT 0/1 | |
| 17 2 200 . A <DEL> . PASS END=210 GT 1/0 | |
| 18 2 481 . T c,a . PASS . GT 0/2 |