Mercurial > repos > jjohnson > bcftools_plugin_missing2ref
comparison test-data/concat.2.a.vcf @ 0:ff65d6e0809b draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
| author | jjohnson |
|---|---|
| date | Sat, 25 Jun 2016 20:51:04 -0400 |
| parents | |
| children |
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| -1:000000000000 | 0:ff65d6e0809b |
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| 1 ##fileformat=VCFv4.0 | |
| 2 ##INFO=<ID=XX,Number=1,Type=Integer,Description="Test"> | |
| 3 ##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth"> | |
| 4 ##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality"> | |
| 5 ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth"> | |
| 6 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> | |
| 7 ##FILTER=<ID=Fail,Description="Fail"> | |
| 8 ##contig=<ID=1,length=62435964> | |
| 9 ##contig=<ID=2,length=62435964> | |
| 10 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A | |
| 11 2 140 . A G 727 PASS DP=30 GT:GQ:DP 0/1:150:30 | |
| 12 2 160 . TAAAA TA,TC,T 246 PASS DP=10 GT:GQ:DP 0/2:12:10 | |
| 13 1 110 . C T,G 1792 Fail XX=11;DP=32 GT:GQ:DP 0/1:245:32 | |
| 14 1 130 . GAA GG 1016 PASS DP=22 GT:GQ:DP 0/1:212:22 | |
| 15 1 130 . G T 1016 PASS DP=22 GT:GQ:DP 0/1:212:22 |