Mercurial > repos > jjohnson > bcftools_plugin_frameshifts

annotate test-data/stats.b.vcf @ 1:eb0cb4a5f478 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
author jjohnson
date Sun, 26 Jun 2016 15:39:35 -0400
parents 53bf140c7d55
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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0
53bf140c7d55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff changeset
1 ##fileformat=VCFv4.2
53bf140c7d55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff changeset
2 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
53bf140c7d55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff changeset
3 ##contig=<ID=1,assembly=b37,length=249250621>
53bf140c7d55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff changeset
4 ##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta
53bf140c7d55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff changeset
5 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B C
53bf140c7d55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
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6 1 1000 . G A . PASS . GT 0/1 0/0 0/0
53bf140c7d55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff changeset
7 1 1001 . G A . PASS . GT 0/0 0/0 0/0
53bf140c7d55 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
parents:
diff changeset
8 1 1002 . G A . PASS . GT 0/0 0/1 0/0