Mercurial > repos > jjohnson > bcftools_convert_from_vcf
diff test-data/vcf2sex.vcf @ 0:d396503fdbdb draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
| author | jjohnson |
|---|---|
| date | Sat, 25 Jun 2016 20:47:20 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/vcf2sex.vcf Sat Jun 25 20:47:20 2016 -0400 @@ -0,0 +1,24 @@ +##fileformat=VCFv4.2 +##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> +##contig=<ID=X,assembly=b37,length=249250621> +##contig=<ID=Y,assembly=b37,length=249250621> +#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT MALE FEMALE +X 1 . C A . PASS . GT 1 0/1 +X 12000 . C A . PASS . GT 0 0/1 +X 24000 . C A . PASS . GT 1 0/1 +X 36000 . C A . PASS . GT 0 0/1 +X 48000 . C A . PASS . GT 1 0/1 +X 60000 . C A . PASS . GT 0 0/1 +X 100000 . C A . PASS . GT 0/1 0/1 +X 2699521 . C A . PASS . GT 0 0/1 +X 33145825 . C A . PASS . GT 1 0/1 +X 63592129 . C A . PASS . GT 1 0/1 +X 94038433 . C A . PASS . GT 0 0/1 +X 124484737 . C A . PASS . GT 0 0/1 +X 154931043 . C A . PASS . GT 0/1 0/1 +Y 1 . C A . PASS . GT 0 . +Y 11874713 . C A . PASS . GT 0 . +Y 23749426 . C A . PASS . GT 0 . +Y 35624139 . C A . PASS . GT 0 . +Y 47498852 . C A . PASS . GT 0 . +Y 59373565 . C A . PASS . GT 0 .