Mercurial > repos > jjohnson > bcftools_convert_from_vcf
diff test-data/concat.3.c.vcf @ 0:d396503fdbdb draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
| author | jjohnson |
|---|---|
| date | Sat, 25 Jun 2016 20:47:20 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/concat.3.c.vcf Sat Jun 25 20:47:20 2016 -0400 @@ -0,0 +1,22 @@ +##fileformat=VCFv4.0 +##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth"> +##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> +##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality"> +##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth"> +##FILTER=<ID=q10,Description="Quality below 10"> +##contig=<ID=2,length=62435964> +#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B +2 280 . T A 246 PASS DP=10 GT 1|0 0|1 +2 290 . T A 246 PASS DP=10 GT 1|0 1|0 +2 300 . T A 246 PASS DP=10 GT 0|1 1|0 +2 310 . T A 246 PASS DP=10 GT 0|1 1|0 +2 320 . T A 246 PASS DP=10 GT 0|1 1|0 +2 330 . T A 246 PASS DP=10 GT 0|1 1|0 +2 340 . T A 246 PASS DP=10 GT 0|1 1|0 +2 350 . T A 246 PASS DP=10 GT 0|1 1|0 +2 360 . T A 246 PASS DP=10 GT 0|1 1|0 +2 370 . T A 246 PASS DP=10 GT 0|1 1|0 +2 380 . T A 246 PASS DP=10 GT 0|1 1|0 +2 390 . T A 246 PASS DP=10 GT 0|1 1|0 +2 400 . T A 246 PASS DP=10 GT 0|1 1|0 +2 410 . T A 246 PASS DP=10 GT 0|1 1|0