Mercurial > repos > jjohnson > bcftools_consensus
comparison bcftools_consensus.xml @ 1:e7657a41b32a draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
| author | jjohnson |
|---|---|
| date | Sun, 26 Jun 2016 15:47:57 -0400 |
| parents | 1c55de3bf217 |
| children |
comparison
equal
deleted
inserted
replaced
| 0:1c55de3bf217 | 1:e7657a41b32a |
|---|---|
| 65 <test> | 65 <test> |
| 66 <param name="reference_fasta" ftype="fasta" value="consensus.fa" /> | 66 <param name="reference_fasta" ftype="fasta" value="consensus.fa" /> |
| 67 <param name="input_file" ftype="vcf" value="consensus.vcf" /> | 67 <param name="input_file" ftype="vcf" value="consensus.vcf" /> |
| 68 <param name="mask" ftype="tabular" value="consensus.tab" /> | 68 <param name="mask" ftype="tabular" value="consensus.tab" /> |
| 69 <param name="chain" value="True" /> | 69 <param name="chain" value="True" /> |
| 70 <output name="output_file" file="consensus.1.out" lines_diff="6"/> | 70 <output name="output_file"> |
| 71 <output name="output_file" file="consensus.1.chain" /> | 71 <assert_contents> |
| 72 <has_text text="NNNNNNNNNNNNNNNNNNNNNNNNNN" /> | |
| 73 </assert_contents> | |
| 74 </output> | |
| 75 <output name="chain_file"> | |
| 76 <assert_contents> | |
| 77 <has_text text="chain 497 1 501 + 1 501 1 502 + 1 502 1" /> | |
| 78 </assert_contents> | |
| 79 </output> | |
| 72 </test> | 80 </test> |
| 73 </tests> | 81 </tests> |
| 74 <help><![CDATA[ | 82 <help><![CDATA[ |
| 75 ===================================== | 83 ===================================== |
| 76 bcftools @EXECUTABLE@ plugin | 84 bcftools @EXECUTABLE@ plugin |