Mercurial > repos > jjohnson > bcftools_cnv

annotate test-data/concat.3.d.vcf @ 2:449bc9259def draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
author jjohnson
date Sun, 26 Jun 2016 15:47:04 -0400
parents b50e0b926cde
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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1 ##fileformat=VCFv4.0
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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2 ##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth">
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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3 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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4 ##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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5 ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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6 ##FILTER=<ID=q10,Description="Quality below 10">
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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7 ##contig=<ID=2,length=62435964>
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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8 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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9 2 300 . T A 246 PASS DP=10 GT 1|0 1|0
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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10 2 320 . T A 246 PASS DP=10 GT 1|0 1|0
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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11 2 330 . T A 246 PASS DP=10 GT 1|0 1|0
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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12 2 340 . T A 246 PASS DP=10 GT 1|0 1|0
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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13 2 350 . T A 246 PASS DP=10 GT 1|0 1|0
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
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14 2 360 . T A 246 PASS DP=10 GT 1|0 1|0
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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15 2 370 . T A 246 PASS DP=10 GT 1|0 1|0
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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16 2 380 . T A 246 PASS DP=10 GT 1|0 1|0
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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17 2 390 . T A 246 PASS DP=10 GT 1|0 1|0
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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18 2 490 . T A 246 PASS DP=10 GT 1|0 1|0
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
jjohnson
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19 2 500 . T A 246 PASS DP=10 GT 1|0 1|0
b50e0b926cde planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 21c66fb27c7e2fd21c7f7607b3b29e77e64fb86d-dirty
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20 2 510 . T A 246 PASS DP=10 GT 1|0 1|0