Mercurial > repos > jjohnson > augustus_dep
comparison tool_dependencies.xml @ 8:8efa8a337565 draft default tip
tool_dependencies.xml - try download_by_url
| author | Jim Johnson <jj@umn.edu> |
|---|---|
| date | Thu, 25 Oct 2012 15:49:37 -0500 |
| parents | bf047bff79df |
| children |
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| 7:bf047bff79df | 8:8efa8a337565 |
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| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | 2 <tool_dependency> |
| 3 <package name="augustus" version="2.6.1"> | 3 <package name="augustus" version="2.6.1"> |
| 4 <install version="1.0"> | 4 <install version="1.0"> |
| 5 <actions> | 5 <actions> |
| 6 <action type="shell_command">mkdir augustus</action> | |
| 7 <!-- the first command puts us in the dir for the package name: "augustus"--> | 6 <!-- the first command puts us in the dir for the package name: "augustus"--> |
| 8 <action type="shell_command">wget --quiet http://bioinf.uni-greifswald.de/augustus/binaries/augustus.2.6.1.tar.gz</action> | 7 <action type="download_by_url">http://bioinf.uni-greifswald.de/augustus/binaries/augustus.2.6.1.tar.gz</action> |
| 9 <action type="shell_command">tar zxf augustus.2.6.1.tar.gz</action> | |
| 10 <action type="shell_command">make</action> | 8 <action type="shell_command">make</action> |
| 11 <action type="move_directory_files"> | 9 <action type="move_directory_files"> |
| 12 <source_directory>bin</source_directory> | 10 <source_directory>bin</source_directory> |
| 13 <destination_directory>$INSTALL_DIR/bin</destination_directory> | 11 <destination_directory>$INSTALL_DIR/bin</destination_directory> |
| 14 </action> | 12 </action> |
| 32 </actions> | 30 </actions> |
| 33 </install> | 31 </install> |
| 34 <readme>http://augustus.gobics.de/binaries/README.TXT</readme> | 32 <readme>http://augustus.gobics.de/binaries/README.TXT</readme> |
| 35 </package> | 33 </package> |
| 36 </tool_dependency> | 34 </tool_dependency> |
| 37 |