# HG changeset patch
# User jeremyjliu
# Date 1415381864 18000
# Node ID ef85d5e787d7881a7b47ec705c8e043a51e07506
# Parent  72d91953d77f841949bc78e9d9d88f70a2a2fe55
Corrected to \$R_SCRIPT_PATH

diff -r 72d91953d77f -r ef85d5e787d7 region_motif_intersect.xml
--- a/region_motif_intersect.xml	Fri Nov 07 12:21:54 2014 -0500
+++ b/region_motif_intersect.xml	Fri Nov 07 12:37:44 2014 -0500
@@ -2,10 +2,9 @@
   <description>for computing the motifs that lie inside a region set</description>
   <requirements>
     <requirement type="set_environment">R_SCRIPT_PATH</requirement>
-    <requirement type="package" version="2.15.1">R</requirement>
   </requirements>
   <command interpreter="Rscript">
-    region_motif_intersect.r --args $R_SCRIPT_PATH $db_type $in_bed $out_tab
+    region_motif_intersect.r --args \$R_SCRIPT_PATH $db_type $in_bed $out_tab
   </command>
   <inputs>
     <param name="in_bed" type="data" format="bed" label="Input BED File" />