Mercurial > repos > jeremyjliu > region_motif_enrichment

diff region_motif_compare.r @ 36:b868314320e2 draft

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Uploaded
author jeremyjliu
date Fri, 06 Mar 2015 13:24:03 -0500
parents 4ce22698acb0
children 76e108a19e64
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--- a/region_motif_compare.r	Thu Feb 26 22:54:09 2015 -0500
+++ b/region_motif_compare.r	Fri Mar 06 13:24:03 2015 -0500
@@ -23,7 +23,7 @@
 # Set common and data directories
 args <- commandArgs()
 workingDir = args[7]
-pwmFile = args[8].split(',')[0] # If duplicate entires, take first one
+pwmFile = unlist(strsplit(args[8], ','))[1]  # If duplicate entires, take first one
 
 # Set input and reference files
 inTab1 = args[9]