comparison region_motif_intersect.r @ 36:b868314320e2 draft

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35:4ce22698acb0

  return(paste(input_list, sep="", collapse=""))
}

# Retrive motif database path
args <- commandArgs()
motifDB_bgz = args[7].split(',')[0] # Handles duplicate entries in data table
motifDB_tbi = args[8].split(',')[0] # Just takes the first one

# Set input and reference files, comment to toggle commmand line arguments
inBed = args[9]
outTab = args[10]

36:b868314320e2

  return(paste(input_list, sep="", collapse=""))
}

# Retrive motif database path
args <- commandArgs()
motifDB_bgz = unlist(strsplit(args[7], ','))[1] # Handles duplicate entries in data table
motifDB_tbi = unlist(strsplit(args[8], ','))[1] # Just takes the first one

# Set input and reference files, comment to toggle commmand line arguments
inBed = args[9]
outTab = args[10]