Mercurial > repos > jeremyjliu > region_motif_enrichment

comparison tool_dependencies.xml @ 31:0e031bf8c5b1 draft

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author jeremyjliu
date Wed, 04 Feb 2015 13:52:22 -0500
parents da0bc6dead0d
children 4ce22698acb0
comparison
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30:da0bc6dead0d 31:0e031bf8c5b1
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <set_environment version="1.0"> 3 <set_environment version="1.0">
4 <environment_variable name="RMOTIF_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable> 4 <environment_variable name="RMOTIF_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable>
5 </set_environment> 5 </set_environment>
6 <package name="MOTIFS" version="1.0.0"> 6 <!--<package name="MOTIFS" version="1.0.0">
7 <install version="1.0"> 7 <install version="1.0">
8 <actions> 8 <actions>
9 <action type="download_by_url">http://gehlenborg.com/wp-content/uploads/motif/pouya_test_motifs.bed.bgz</action> 9 <action type="download_by_url">http://gehlenborg.com/wp-content/uploads/motif/pouya_test_motifs.bed.bgz</action>
10 <action type="shell_command">mv pouya_test_motifs.bed.bgz $REPOSITORY_INSTALL_DIR/region_motif_db</action> 10 <action type="shell_command">mv pouya_test_motifs.bed.bgz $REPOSITORY_INSTALL_DIR/region_motif_db</action>
11 <action type="download_by_url">http://gehlenborg.com/wp-content/uploads/motif/pouya_test_motifs.bed.bgz.tbi</action> 11 <action type="download_by_url">http://gehlenborg.com/wp-content/uploads/motif/pouya_test_motifs.bed.bgz.tbi</action>
12 <action type="shell_command">mv pouya_test_motifs.bed.bgz.tbi $REPOSITORY_INSTALL_DIR/region_motif_db</action> 12 <action type="shell_command">mv pouya_test_motifs.bed.bgz.tbi $REPOSITORY_INSTALL_DIR/region_motif_db</action>
13 </actions> 13 </actions>
14 </install> 14 </install>
15 </package> 15 </package>-->
16 </tool_dependency> 16 </tool_dependency>