# HG changeset patch
# User jeremie
# Date 1403855877 14400
# Node ID f245457ea73ee29a5dc190041938fb8a70b8801d
# Parent  bf3749e70af6a20964bf6c80eb59f1806098a906
Uploaded

diff -r bf3749e70af6 -r f245457ea73e tool_dependencies.xml
--- a/tool_dependencies.xml	Fri Jun 27 03:46:06 2014 -0400
+++ b/tool_dependencies.xml	Fri Jun 27 03:57:57 2014 -0400
@@ -3,16 +3,28 @@
 	<package name="breakdancer-max" version="1.2.6">
 		<install version="1.0">
 			<actions>
-				<action type="download_binary" target_directory="bin" target_filename="breakdancer-max">
+				<action type="download_binary" target_directory="bin">
 					<url_template os="linux">https://www.dropbox.com/s/uu6i5m6ri32ogo9/breakdancer-max?dl=1</url_template>
 				</action>
 
-				<action type="download_binary" target_directory="bin" target_filename="/bam2cfg.pl">
+				<action type="download_binary" target_directory="bin">
 					<url_template os="linux">https://www.dropbox.com/s/owg7s479fyq8zps/bam2cfg.pl?dl=1</url_template>
 				</action>
-				<action type="download_binary" target_directory="bin" target_filename="breakdancer2vcf.py">
+				<action type="download_binary" target_directory="bin">
 					<url_template os="linux">https://www.dropbox.com/s/4yj96h4srk0uaf7/breakdancer2vcf.py?dl=1</url_template>
 				</action>
+				<action type="move_file">
+					<source>$INSTALL_DIR/bin/breakdancer-max?dl=1</source>
+					<destination>$INSTALL_DIR/bin/breakdancer-max</destination>
+				</action>
+				<action type="move_file">
+					<source>$INSTALL_DIR/bin/bam2cfg.pl?dl=1</source>
+					<destination>$INSTALL_DIR/bin/bam2cfg.pl</destination>
+				</action>
+				<action type="move_file">
+					<source>$INSTALL_DIR/bin/breakdancer2vcf.py?dl=1</source>
+					<destination>$INSTALL_DIR/bin/breakdancer2vcf.py</destination>
+				</action>
 				<action type="chmod">
 					<file mode="750">$INSTALL_DIR/bin/*</file>
 				</action>