# HG changeset patch
# User jeremie
# Date 1403794625 14400
# Node ID c1552047c0cb94acffd0411e9a984394f20003f6
# Parent  2ea8ed21eadd38ea312f8d7a18b8cf0df3daf054
Uploaded

diff -r 2ea8ed21eadd -r c1552047c0cb tool_dependencies.xml
--- a/tool_dependencies.xml	Thu Jun 26 10:52:22 2014 -0400
+++ b/tool_dependencies.xml	Thu Jun 26 10:57:05 2014 -0400
@@ -3,18 +3,12 @@
 	<package name="breakdancer-max" version="1.2.6">
 		<install version="1.0">
 			<actions>
-<!-- 				<action type="shell_command">wget https://www.dropbox.com/s/uu6i5m6ri32ogo9/breakdancer-max</action> -->
-
-				<action type="shell_command">env</action>
-				<action type="shell_command">echo env</action>
-				<action type="shell_command">ls</action>
-				<action type="shell_command">pwd</action>
-				<action type="shell_command">echo $INSTALL_DIR</action>
-				<action type="shell_command">echo $tool_shed_repository_install_dir</action>
-				<action type="shell_command">$REPOSITORY_INSTALL_DIR</action>
-				<!-- <action type="shell_command">unzip 1_2_6.zip</action>
-				<action type="shell_command">ls</action>
-				<action type="shell_command">pwd</action> -->
+				<action type="download_binary" target_directory="bin">
+                    <url_template os="linux">https://www.dropbox.com/s/uu6i5m6ri32ogo9/breakdancer-max</url_template>
+                </action>
+                <action type="chmod">
+                    <file mode="750">$INSTALL_DIR/bin/breakdancer-max</file>
+                </action>
 				<action type="shell_command">cp $REPOSITORY_INSTALL_DIR/breakdancer-max $INSTALL_DIR/bin</action>
 				<action type="shell_command">cp $REPOSITORY_INSTALL_DIR/bam2cfg.pl $INSTALL_DIR/bin</action>
 				<action type="shell_command">cp $REPOSITORY_INSTALL_DIR/breakdancer2vcf.py $INSTALL_DIR/bin</action>