# HG changeset patch
# User jeremie
# Date 1403794952 14400
# Node ID 7b996c27bdae6a5ae8ce590fcbf559e6be739338
# Parent  c1552047c0cb94acffd0411e9a984394f20003f6
Uploaded

diff -r c1552047c0cb -r 7b996c27bdae tool_dependencies.xml
--- a/tool_dependencies.xml	Thu Jun 26 10:57:05 2014 -0400
+++ b/tool_dependencies.xml	Thu Jun 26 11:02:32 2014 -0400
@@ -9,9 +9,15 @@
                 <action type="chmod">
                     <file mode="750">$INSTALL_DIR/bin/breakdancer-max</file>
                 </action>
-				<action type="shell_command">cp $REPOSITORY_INSTALL_DIR/breakdancer-max $INSTALL_DIR/bin</action>
+                <action type="download_binary" target_directory="bin">
+                    <url_template os="linux">https://www.dropbox.com/s/owg7s479fyq8zps/bam2cfg.pl</url_template>
+                </action>
+                <action type="download_binary" target_directory="bin">
+                    <url_template os="linux">https://www.dropbox.com/s/4yj96h4srk0uaf7/breakdancer2vcf.py</url_template>
+                </action>
+				<!-- <action type="shell_command">cp $REPOSITORY_INSTALL_DIR/breakdancer-max $INSTALL_DIR/bin</action>
 				<action type="shell_command">cp $REPOSITORY_INSTALL_DIR/bam2cfg.pl $INSTALL_DIR/bin</action>
-				<action type="shell_command">cp $REPOSITORY_INSTALL_DIR/breakdancer2vcf.py $INSTALL_DIR/bin</action>
+				<action type="shell_command">cp $REPOSITORY_INSTALL_DIR/breakdancer2vcf.py $INSTALL_DIR/bin</action> -->
 				<action type="set_environment">
 					<environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
 				</action>