# HG changeset patch
# User jeremie
# Date 1404309833 14400
# Node ID c220f4acef3f6479e5bab498a98b1316c6b0aa9f
# Parent  a8f3dba37a9223b481645e0829e09fa0bbb132b6
Uploaded

diff -r a8f3dba37a92 -r c220f4acef3f breakdancer.xml
--- a/breakdancer.xml	Wed Jul 02 10:00:43 2014 -0400
+++ b/breakdancer.xml	Wed Jul 02 10:03:53 2014 -0400
@@ -52,7 +52,7 @@
 		<param name="maxHaploidCov" type="integer" label="maximum threshold of haploid sequence coverage for regions to be ignored" value="1000" />
 		<param name="bufferSize" type="integer" label="buffer size for building connection" value="100" />
 		<param name="onlyTrans" type="boolean" label="only detect transchromosomal rearrangement" checked="False" />
-		<param name="bufferSize" type="text" label="prefix of fastq files that SV supporting reads will be saved by library" value="" />
+		<param name="prefix" type="text" label="prefix of fastq files that SV supporting reads will be saved by library" value="" />
 		<param name="bedFormat" type="boolean" label="dump SVs and supporting reads in BED format for GBrowse" checked="False" />
 	</inputs>