# HG changeset patch
# User jeremie
# Date 1403782010 14400
# Node ID 4a5a1765951d754353f5067e896ee7e68e36a3a7
# Parent  798aba6c26a2bcbb2d91428f0ade2c4b5ce8c2db
Uploaded

diff -r 798aba6c26a2 -r 4a5a1765951d breakdancer_1_2_6.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/breakdancer_1_2_6.xml	Thu Jun 26 07:26:50 2014 -0400
@@ -0,0 +1,26 @@
+<tool id="breakdancer" name="breakdancer" version="1.2.6">
+	<description></description>
+	<parallelism method="basic"></parallelism>
+		<command interpreter="python">
+			breakdancer_1_2_6.py
+			-i1 $input
+			-o1 $output_raw
+			-o2 $output_vcf
+	</command>
+
+ <!--  <requirements>
+		<requirement type="package">breakdancer-max</requirement>
+	</requirements> -->
+
+	<inputs>
+		<param format="bam" name="input" type="data" help=""  label="bam file" />
+	</inputs>
+
+	<outputs>
+		<data name="output_raw" format="tabular" label="breakdancer raw" />
+		<data name="output_vcf" format="vcf" label="breakdancer vcf" />
+	</outputs>
+	<help>
+
+	</help>
+</tool>
\ No newline at end of file