Mercurial > repos > jeanfred > sortmerna

diff tool-data/rRNA_databases.loc.sample @ 2:5048c53a90f4 draft

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author jeanfred
date Wed, 10 Apr 2013 10:25:15 -0400
parents 6ca486721ddd
children
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--- a/tool-data/rRNA_databases.loc.sample	Fri Apr 05 13:07:39 2013 -0400
+++ b/tool-data/rRNA_databases.loc.sample	Wed Apr 10 10:25:15 2013 -0400
@@ -10,17 +10,17 @@
 #So, for example, if your database is rfam-5.8s and the path to your base name
 #is /data/rRNA_databases/rfam-5.8s, then the rRNA_databases.loc entry would look like this:
 #
-#rfam-5.8s          Database Rfam 5.8s            /data/rRNA_databases/rfam-5.8s
+#rfam-5.8s          Rfam 5.8S eukarya            /data/rRNA_databases/rfam-5.8s
 #
 #Since SortMeRNA comes bundled with eight ribosomal databases, which are ready
 #for use after the tool installation, this sample file is in fact an actual file
 #to save the user the trouble of setting it.
 #
-rfam-5.8s	Database Rfam 5.8s	$SORTMERNADIR/rRNA_databases/rfam-5.8s-database-id98.fasta
-rfam-5s	Database Rfam 5s	$SORTMERNADIR/rRNA_databases/rfam-5s-database-id98.fasta
-silva-arc-16s	Database Silva-Arc 16s	$SORTMERNADIR/rRNA_databases/silva-arc-16s-database-id95.fasta
-silva-arc-23s	Database Silva-Arc 23s	$SORTMERNADIR/rRNA_databases/silva-arc-23s-database-id98.fasta
-silva-bac-16s	Database Silva-Bac 16s	$SORTMERNADIR/rRNA_databases/silva-bac-16s-database-id85.fasta
-silva-bac-23s	Database Silva-Bac 23s	$SORTMERNADIR/rRNA_databases/silva-bac-23s-database-id98.fasta
-silva-euk-18s	Databse Silva-Euk 18s	$SORTMERNADIR/rRNA_databases/silva-euk-18s-database-id95.fasta
-silva-euk-28s	Database Silva-Euk 28s	$SORTMERNADIR/rRNA_databases/silva-euk-28s-database-id98.fasta
+rfam-5.8s	Rfam 5.8S eukarya	$SORTMERNADIR/rRNA_databases/rfam-5.8s-database-id98.fasta
+rfam-5s	Rfam 5S archaea/bacteria	$SORTMERNADIR/rRNA_databases/rfam-5s-database-id98.fasta
+silva-arc-16s	SILVA 16S archaea	$SORTMERNADIR/rRNA_databases/silva-arc-16s-database-id95.fasta
+silva-arc-23s	SILVA 16S bacteria	$SORTMERNADIR/rRNA_databases/silva-arc-23s-database-id98.fasta
+silva-bac-16s	SILVA 16S bacteria	$SORTMERNADIR/rRNA_databases/silva-bac-16s-database-id85.fasta
+silva-bac-23s	SILVA 23S bacteria	$SORTMERNADIR/rRNA_databases/silva-bac-23s-database-id98.fasta
+silva-euk-18s	SILVA 18S eukarya	$SORTMERNADIR/rRNA_databases/silva-euk-18s-database-id95.fasta
+silva-euk-28s	SILVA 28S eukarya	$SORTMERNADIR/rRNA_databases/silva-euk-28s-database-id98.fasta