# HG changeset patch
# User jbrayet
# Date 1439544138 14400
# Node ID d46b45f7d704263ff6987c5c3fedd6b8cd5b8758
# Parent  b7fd2ce998eeccc53354559838c5cef34fe99034
Deleted selected files

diff -r b7fd2ce998ee -r d46b45f7d704 tool_dependencies.xml
--- a/tool_dependencies.xml	Fri Aug 14 05:16:26 2015 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,37 +0,0 @@
-<?xml version="1.0"?>
-<tool_dependency>
-  <package name="R" version="3.1.2">
-      <repository changeset_revision="41f43a2064ba" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-  </package>
-      <package name="sequenza" version="2.1.1">
-        <install version="1.0">
-            <actions>
-                <action type="setup_r_environment">
-                    <repository changeset_revision="41f43a2064ba" name="package_r_3_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
-                        <package name="R" version="3.1.2" />
-                    </repository>
-                    <package>https://github.com/jbrayet/R_package_Galaxy/raw/master/BiocGenerics_0.14.0.tar.gz</package>
-                    <package>https://github.com/jbrayet/R_package_Galaxy/raw/master/S4Vectors_0.6.3.tar.gz</package>
-                    <package>https://github.com/jbrayet/R_package_Galaxy/raw/master/IRanges_1.0.16.tar.gz</package>
-                    <package>https://github.com/jbrayet/R_package_Galaxy/raw/master/GenomeInfoDb_1.4.1.tar.gz</package>
-                    <package>https://github.com/jbrayet/R_package_Galaxy/raw/master/XVector_0.8.0.tar.gz</package>
-                    <package>https://github.com/jbrayet/R_package_Galaxy/raw/master/GenomicRanges_1.20.5.tar.gz</package>
-                    <package>https://github.com/jbrayet/R_package_Galaxy/raw/master/copynumber_1.8.0.tar.gz</package>
-                    <package>https://github.com/jbrayet/R_package_Galaxy/raw/master/squash_1.0.7.tar.gz</package>
-                    <package>https://github.com/jbrayet/R_package_Galaxy/raw/master/sequenza_2.1.1.tar.gz</package>
-                </action>
-            </actions>
-        </install>
-        <readme>
-            Hmisc: Harrell Miscellaneous
-
-            Contains many functions useful for data analysis, high-level graphics, utility operations,
-            functions for computing sample size and power, importing and annotating datasets,
-            imputing missing values, advanced table making, variable clustering, character string
-            manipulation, conversion of R objects to LaTeX code, and recoding variables.
-
-            http://biostat.mc.vanderbilt.edu/Hmisc
-            https://github.com/harrelfe/Hmisc
-        </readme>
-    </package>
-</tool_dependency>