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author | oinizan |
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date | Wed, 25 May 2016 09:43:12 -0400 |
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Chromosome Start End Max Score DistTSS Type TypeIntra Reg FoldChange DistTE GeneName GeneCoordinates chr1 51990184 51992754 51991506 185.232 -18688 enhancer NA no-response 0.99805296 -184897 Myo1b chr1:51806609-51972818;51806609,51812486,51813948,51814719,51817138,51819335,51820733,51823665,51825847,51827629,51830076,51831155,51833047,51835164,51836404,51838813,51841280,51850483,51851155,51853842,51854231,51856375,51858027,51869846,51876984,51880940,51891292,51920162,51939926,51972604,-51808140,51812614,51814101,51814852,51817245,51819470,51820808,51823752,51825934,51827698,51830226,51831249,51833248,51835391,51836605,51838876,51841385,51850549,51851242,51853961,51854379,51856479,51858126,51869910,51877031,51881045,51891387,51920278,51940070,51972818, chr1 60126773 60128669 60127805 155.165 -27874 enhancer NA no-response 0.955993942 -81894 Ica1l chr1:60045911-60099931;60045911,60054294,60060499,60063077,60064651,60066952,60070663,60072555,60079421,60084911,60099640,-60048083,60054555,60060549,60063163,60064750,60067078,60070862,60072679,60079494,60085080,60099931, chr1 75183604 75186098 75184689 127.048 3808 intragenic jonction NA 1 -7250 Atg9a chr1:75177439-75188497;75177439,75179165,75179467,75181029,75181262,75181626,75182239,75182524,75182763,75184258,75184518,75186136,75186685,75186876,75187396,75188397,-75178505,75179311,75179690,75181147,75181441,75181875,75182419,75182678,75183512,75184400,75184680,75186201,75186729,75187008,75187451,75188497, chr1 134237109 134239637 134238461 126.426 25760 intergenic NA no-response 0.818992729 8396 Nuak2 chr1:134212701-134230065;134212701,134221529,134222782,134224273,134224707,134226534,134227135,134227897,-134213049,134221650,134222806,134224425,134224773,134226654,134227268,134230065, chr1 165313138 165315235 165313947 124.948 19825 5kbDownstream NA NA 1 1092 Gorab chr1:165315039-165333772;165315039,165322540,165324721,165326942,165333653,-165316828,165322681,165324823,165327300,165333772, chr1 64167272 64170229 64168852 113.558 -889 promoter NA up-regulated 0.59 -86606 Klf7 chr1:64082246-64167963;64082246,64088887,64125280,64167473,-64082338,64089011,64125908,64167963, chr1 51986012 51989067 51987565 109.617 -14747 enhancer NA no-response 0.99805296 -180956 Myo1b chr1:51806609-51972818;51806609,51812486,51813948,51814719,51817138,51819335,51820733,51823665,51825847,51827629,51830076,51831155,51833047,51835164,51836404,51838813,51841280,51850483,51851155,51853842,51854231,51856375,51858027,51869846,51876984,51880940,51891292,51920162,51939926,51972604,-51808140,51812614,51814101,51814852,51817245,51819470,51820808,51823752,51825934,51827698,51830226,51831249,51833248,51835391,51836605,51838876,51841385,51850549,51851242,51853961,51854379,51856479,51858126,51869910,51877031,51881045,51891387,51920278,51940070,51972818, chr1 182657743 182659706 182658573 108.679 2400 intragenic f_intron NA 1 -25762 Acbd3 chr1:182656173-182684335;182656173,182663296,182664507,182666822,182668593,182675201,182676924,182682289,-182656509,182663438,182664648,182666981,182668768,182675388,182677209,182684335, chr1 88404369 88408894 88406101 101.37 -17209 enhancer NA NA 1 -21172 Ptma chr1:88423310-88427273;88423310,88425747,88426030,88426305,88426539,-88423525,88425819,88426127,88426379,88427273, chr1 133366130 133369052 133367391 100.62 56547 intragenic intron NA 1 -185564 Srgap2 chr1:133181827-133423938;133181827,133189097,133192896,133194908,133196969,133207050,133213705,133216101,133217011,133221664,133228693,133230433,133232966,133240925,133242338,133246028,133252087,133253266,133260578,133308376,133333251,133421514,133423809,-133186317,133189422,133193043,133195089,133197049,133207275,133213811,133216236,133217089,133221725,133228718,133230461,133233051,133241123,133242440,133246253,133252216,133253482,133260641,133308539,133333444,133422170,133423938, chr1 172637708 172641516 172639841 98.192 158061 intragenic exon NA 1 -5254 Atf6 chr1:172634587-172797902;172634587,172677236,172717476,172718738,172724087,172724787,172729744,172745553,172749377,172764950,172770811,172771816,172779247,172783035,172785243,172797780,-172640218,172677321,172717591,172718806,172724187,172724901,172729876,172745645,172749563,172765171,172771015,172771943,172779348,172783123,172785320,172797902, chr1 89544861 89546487 89545464 95.246 28578 intragenic intron up-regulated 0.54 -71619 Inpp5d chr1:89516886-89617083;89516886,89531866,89561961,89564463,89566216,89572857,89578063,89578261,89580317,89588199,89591907,89593923,89594687,89595602,89596214,89597734,89597989,89599692,89602508,89604670,89606192,89607639,89608605,89609767,89611612,89614264,89615895,-89517206,89531930,89562112,89564638,89566357,89572945,89578144,89578333,89580441,89588306,89592010,89594120,89594805,89595699,89596353,89597843,89598078,89599774,89602598,89604784,89606275,89607727,89608755,89609864,89611888,89614859,89617083, chr1 193146718 193150678 193149744 94.908 -99 promoter NA NA 1 -27060 Tmem206 chr1:193149843-193176804;193149843,193152061,193162660,193164605,193168855,193170638,193172246,193173567,-193149955,193152158,193162870,193164757,193168998,193170783,193172354,193176804, chr1 36320224 36322856 36321174 93.869 -20027 enhancer NA NA 1 -124302 Uggt1 chr1:36196872-36301147;36196872,36202876,36203469,36206889,36208478,36211917,36213071,36214244,36214952,36216786,36218520,36219049,36220065,36221288,36222353,36227043,36230279,36230923,36231740,36233077,36233620,36234362,36236403,36239314,36241200,36242677,36248373,36249230,36252694,36254388,36258549,36259623,36264786,36266830,36268234,36272976,36278056,36284328,36287502,36291651,36300914,-36201096,36203030,36203586,36207004,36208639,36212100,36213156,36214346,36215041,36216871,36218606,36219208,36220255,36221368,36222456,36227139,36230410,36231055,36231947,36233172,36233644,36234461,36236524,36239479,36241332,36242813,36248459,36249350,36252845,36254480,36258610,36259723,36264887,36266909,36268331,36273151,36278169,36284459,36287585,36291787,36301147, chr1 181474385 181478078 181476526 93.465 -133 promoter NA NA 1 -81078 Cnst chr1:181476659-181557604;181476659,181509468,181522815,181531832,181534649,181535083,181536378,181536567,181539916,181552897,181555129,-181476747,181509899,181522997,181531863,181534736,181535198,181536400,181536664,181540797,181553033,181557604, chr1 87631082 87634013 87633129 93.188 52 immediateDownstream f_exon NA 1 -19472 A630001G21Rik chr1:87613657-87633181;87613657,87615599,87619672,87621695,87623033,87633046,-87614943,87615704,87619756,87621864,87623190,87633181, chr1 53321101 53323020 53321996 92.607 31844 intragenic intron no-response 1.125816525 -75965 Pms1 chr1:53246031-53353840;53246031,53248943,53251771,53253666,53263405,53264419,53264806,53273074,53313472,53324671,53331913,53338784,53353729,-53246342,53249104,53251902,53254146,53264256,53264563,53264929,53273191,53313636,53324774,53332096,53338936,53353840, chr1 133553853 133555841 133554639 91.135 19749 intragenic f_intron NA 1 -17445 Ctse chr1:133534890-133572084;133534890,133558452,133559189,133559887,133560860,133564613,133567262,133568780,133569021,133571357,-133535134,133558643,133559346,133560005,133560979,133564813,133567385,133568922,133569120,133572084, chr1 24003670 24006731 24005152 85.071 7327 intragenic intron no-response 1.045612002 -2375 1110058L19Rik chr1:24002777-24012479;24002777,24009995,24012384,-24003199,24010145,24012479, chr1 36186500 36189331 36187307 83.732 62063 intergenic NA no-response 1.145451072 24016 Hs6st1 chr1:36125244-36163291;36125244,36160357,-36126029,36163291, chr1 182190527 182194213 182191254 82.962 -15173 enhancer NA up-regulated 0.64 -34120 Psen2 chr1:182157134-182176081;182157134,182158973,182159516,182159972,182163741,182165119,182166041,182169003,182170861,182175744,182175994,-182157859,182159092,182159618,182160056,182163840,182165340,182166109,182169145,182171076,182175888,182176081, chr1 55038767 55040799 55039738 82.324 44584 5kbDownstream NA up-regulated 0.47 2274 Sf3b1 chr1:55042012-55084322;55042012,55044782,55047146,55051173,55052209,55053660,55053855,55054881,55056470,55056858,55057085,55057487,55057855,55058226,55059947,55060136,55062645,55063014,55064323,55068945,55071326,55073219,55073622,55076077,55084182,-55044336,55044999,55047419,55051305,55052330,55053772,55054038,55055103,55056596,55057005,55057231,55057758,55057942,55058406,55060049,55060334,55062767,55063227,55064561,55069116,55071406,55073334,55073727,55076244,55084322, chr1 36975862 36978131 36976794 81.087 19578 intragenic f_intron NA 1 -127761 Tmem131 chr1:36849033-36996372;36849033,36850888,36851648,36851945,36852139,36853006,36855786,36856123,36858669,36861312,36864728,36865671,36867125,36868252,36869005,36869401,36872299,36872731,36872953,36875502,36875737,36875907,36879911,36881560,36882056,36882273,36883855,36884106,36884909,36886410,36890340,36891460,36891606,36894803,36897233,36898438,36911688,36929356,36938178,36946108,36996009,-36850050,36851043,36851746,36852042,36852261,36853169,36855936,36856248,36858797,36861491,36865321,36865830,36867311,36868439,36869148,36869553,36872366,36872841,36873092,36875620,36875813,36876060,36879998,36881665,36882191,36882384,36884026,36884260,36885018,36886519,36890402,36891517,36891757,36894884,36897356,36898555,36911812,36929425,36938219,36946170,36996372, chr1 177454643 177455632 177455221 80.157 -32545 intergenic NA no-response 1.000705337 -466015 Rgs7 chr1:176989206-177422676;176989206,177008319,177009535,177014102,177016246,177019549,177021124,177023934,177051858,177052025,177053061,177079782,177083254,177119307,177200947,177421183,177422391,-176989925,177008409,177009722,177014228,177016357,177019611,177021223,177024009,177051940,177052102,177053126,177079834,177083361,177119358,177201044,177421307,177422676, chr1 59886380 59888476 59887333 77.115 65853 intragenic intron up-regulated 0.35 -40370 Bmpr2 chr1:59821480-59927703;59821480,59870431,59872084,59898274,59899586,59902321,59903901,59908021,59909137,59916016,59920624,59924179,59927078,-59821572,59870602,59872255,59898385,59899678,59902552,59904016,59908182,59909285,59916153,59920797,59925459,59927703, chr1 131672587 131675030 131673879 76.84 503999 intragenic intron no-response 0.990070994 -441976 Thsd7b chr1:131169880-132115855;131169880,131327373,131491946,131509686,131525453,131564390,131574625,131655022,131656845,131672869,131713219,131719168,131812129,131817824,131847966,131999647,132013136,132056150,132059396,132061625,132076928,132085036,132086432,132086707,132089130,132091683,132106817,132114675,-131170177,131327546,131492757,131509935,131525623,131564546,131574823,131655214,131657080,131672985,131713349,131719272,131812324,131818091,131848145,131999781,132013287,132056292,132059512,132061743,132077074,132085196,132086606,132086803,132089213,132091876,132106905,132115855, chr1 52778801 52780335 52779661 76.839 4501 intragenic f_intron NA 1 -62832 Mfsd6 chr1:52716829-52784162;52716829,52719233,52720128,52733321,52765007,52783866,-52717931,52719332,52720290,52733419,52766599,52784162, chr1 89522665 89524223 89523172 74.658 6286 intragenic f_intron up-regulated 0.54 -93911 Inpp5d chr1:89516886-89617083;89516886,89531866,89561961,89564463,89566216,89572857,89578063,89578261,89580317,89588199,89591907,89593923,89594687,89595602,89596214,89597734,89597989,89599692,89602508,89604670,89606192,89607639,89608605,89609767,89611612,89614264,89615895,-89517206,89531930,89562112,89564638,89566357,89572945,89578144,89578333,89580441,89588306,89592010,89594120,89594805,89595699,89596353,89597843,89598078,89599774,89602598,89604784,89606275,89607727,89608755,89609864,89611888,89614859,89617083, chr1 74485100 74489344 74486296 71.038 104564 intragenic intron no-response 1.215744803 -4213 Usp37 chr1:74482083-74590860;74482083,74486533,74488105,74490986,74497068,74499260,74500401,74502652,74506488,74508139,74513488,74514840,74517110,74517869,74518128,74521559,74524620,74526225,74532554,74533192,74536663,74539478,74542203,74546529,74577636,74590748,-74486052,74486672,74488175,74491102,74497129,74499427,74500657,74502794,74506554,74508304,74513568,74514958,74517301,74517993,74518260,74521718,74524705,74526323,74532629,74533371,74536764,74539650,74542427,74546674,74577686,74590860, chr1 74485100 74489344 74486296 71.038 30339 5kbDownstream NA no-response 1.000422122 4162 Vil1 chr1:74455957-74482134;74455957,74461642,74462539,74464933,74466142,74466368,74467826,74468134,74468352,74469500,74470248,74470436,74472110,74473125,74473813,74474052,74474640,74477190,74478864,74481451,-74456010,74461728,74462614,74465130,74466251,74466479,74468029,74468213,74468451,74469654,74470349,74470574,74472269,74473305,74473959,74474197,74474829,74477259,74479005,74482134, chr1 162238528 162240823 162239250 70.216 42452 intragenic intron up-regulated 0.473333333 -89946 Rabgap1l chr1:162149304-162281702;162149304,162156615,162161926,162166756,162168661,162177589,162187573,162272166,162281351,-162154499,162156813,162161998,162166840,162168766,162177700,162187666,162272295,162281702, chr1 32802637 32804951 32803364 69.949 -199226 intergenic NA NA 1 -202974 Gm5415 chr1:32600390-32604138;32600390,-32604138, chr1 69700706 69703228 69701687 65.623 30847 intragenic intron up-regulated 0.3 -123904 Ikzf2 chr1:69577783-69732534;69577783,69588800,69595172,69617066,69624354,69729783,69730697,69732267,-69586066,69588944,69595310,69617234,69624621,69729888,69730746,69732534, chr1 176088652 176090284 176089363 65.366 511 immediateDownstream exon NA 1 -535 Olfr420 chr1:176088852-176089898;176088852,-176089898, chr1 71090915 71092995 71091901 64.35 57645 intragenic intron down-regulated 2.23 -17793 Bard1 chr1:71074108-71149546;71074108,71077932,71093251,71094213,71100186,71112052,71113681,71121116,71134682,71136044,71149241,-71077426,71078030,71093344,71094346,71100295,71112225,71113762,71122054,71134825,71136101,71149546, chr1 174240799 174242815 174241504 63.82 -1033 promoter NA NA 1 -8462 Igsf8 chr1:174242537-174249966;174242537,174246281,174247485,174248167,174248684,174249423,174249714,-174242724,174246659,174247947,174248575,174249098,174249554,174249966, chr1 174441338 174445046 174444305 63.671 -6955 enhancer NA no-response 0.998353417 -31696 Ccdc19 chr1:174451260-174476001;174451260,174457920,174459940,174462211,174462661,174464076,174465341,174468609,174470617,174471315,174475222,174475805,-174451312,174458046,174460083,174462356,174462832,174464255,174465471,174468756,174470731,174471509,174475447,174476001, chr1 77294504 77296236 77295394 63.66 216269 intergenic NA no-response 0.997483622 68365 Epha4 chr1:77363759-77511663;77363759,77369484,77371345,77373988,77377438,77379443,77380097,77384371,77385047,77386607,77395068,77396212,77397774,77423125,77441439,77503122,77508257,77511515,-77366246,77370422,77371501,77374182,77377588,77379653,77380159,77384557,77385161,77386666,77395180,77396372,77397899,77423464,77441595,77503786,77508325,77511663, chr1 133030179 133033471 133032788 63.153 2023 intragenic jonction NA 1 -7771 Dyrk3 chr1:133025017-133034811;133025017,133032836,133034656,-133026822,133032948,133034811, chr1 172725485 172727078 172726046 63.096 71856 intragenic intron NA 1 -91459 Atf6 chr1:172634587-172797902;172634587,172677236,172717476,172718738,172724087,172724787,172729744,172745553,172749377,172764950,172770811,172771816,172779247,172783035,172785243,172797780,-172640218,172677321,172717591,172718806,172724187,172724901,172729876,172745645,172749563,172765171,172771015,172771943,172779348,172783123,172785320,172797902, chr1 158850311 158852732 158851860 62.949 17658 intragenic f_intron NA 1 -117564 Ralgps2 chr1:158734296-158869518;158734296,158741575,158743568,158747871,158749943,158751517,158754121,158758270,158759102,158760515,158762795,158763025,158799571,158814663,158817221,158818077,158830716,158831916,158837769,158869482,-158739324,158741667,158743674,158747964,158750049,158751595,158754176,158758422,158759259,158760583,158762886,158763163,158799698,158814756,158817311,158818161,158830767,158832021,158837909,158869518, chr1 71602712 71605736 71603691 62.939 -38 promoter NA no-response 1.074673726 -22286 Atic chr1:71603729-71625977;71603729,71604070,71605799,71607462,71610332,71610979,71611384,71614387,71615536,71616413,71617413,71619481,71622614,71623190,71624359,71625125,-71603848,71604197,71605876,71607529,71610421,71611131,71611541,71614513,71615644,71616499,71617503,71619610,71622707,71623373,71624515,71625977, chr1 58798703 58801466 58800321 62.896 30192 intragenic intron up-regulated 0.41 -15405 Cflar chr1:58770129-58815726;58770129,58783149,58785899,58787995,58789096,58792501,58797106,58797808,58809182,58810627,-58770503,58783576,58786005,58788131,58789170,58792556,58797156,58797890,58809690,58815726, chr1 193739853 193742679 193741009 62.815 10350 5kbDownstream NA no-response 1.012582131 3883 Slc30a1 chr1:193730659-193737126;193730659,193732729,-193731492,193737126, chr1 167322574 167323781 167323352 62.662 67242 intragenic intron NA 1 -63721 Dcaf6 chr1:167259631-167390594;167259631,167263419,167266875,167268318,167270015,167281014,167281602,167282091,167287559,167318788,167320544,167322269,167329784,167341594,167350241,167352986,167354432,167359384,167390261,-167260134,167263525,167266964,167268475,167270154,167281411,167281671,167282207,167287677,167319046,167320664,167322363,167329999,167341730,167350355,167353172,167354525,167359446,167390594, chr1 152920964 152923760 152921765 61.584 -81200 intergenic NA no-response 0.997202412 -512134 Hmcn1 chr1:152409631-152840565;152409631,152412446,152420605,152424401,152427357,152429352,152430296,152433484,152434078,152435341,152440085,152441041,152442248,152442976,152445065,152445385,152446001,152446610,152450920,152451225,152451974,152454418,152456752,152457747,152459756,152462239,152465970,152470030,152470293,152471616,152474159,152474502,152477345,152477783,152478296,152479535,152480739,152482251,152485982,152493707,152496016,152496708,152497091,152499641,152502922,152503583,152503822,152504200,152504507,152505608,152510987,152511902,152514956,152516502,152519041,152521425,152522642,152523105,152524365,152526638,152527740,152530719,152533794,152536645,152537683,152541966,152544549,152547566,152548961,152550298,152551266,152562830,152566224,152567746,152568742,152569491,152570387,152579932,152581574,152584311,152584607,152585717,152589393,152590716,152592082,152595301,152596074,152597780,152600699,152602385,152603652,152605397,152612486,152617363,152619565,152620893,152645851,152649946,152653497,152655662,152656816,152664150,152666488,152706268,152707348,152723554,152839913,-152411023,152412573,152420725,152424752,152427486,152429478,152430410,152433619,152434198,152435404,152440323,152441163,152442386,152443126,152445236,152445556,152446172,152446781,152451091,152451396,152452244,152454500,152456943,152457882,152459970,152462430,152466240,152470165,152470431,152471724,152474324,152474624,152477502,152477911,152478441,152479677,152480876,152482333,152486179,152493986,152496114,152496892,152497216,152499801,152503072,152503715,152503904,152504403,152504621,152505770,152511084,152512090,152515070,152516697,152519192,152521571,152522756,152523279,152524557,152526725,152527854,152530887,152534076,152536807,152537806,152542063,152544725,152547690,152549113,152550475,152551368,152562954,152566379,152567916,152568851,152569773,152570666,152580087,152581701,152584459,152584738,152585912,152589489,152590986,152592210,152595470,152596234,152597893,152600844,152602513,152603748,152605592,152612645,152617477,152619693,152621035,152646127,152650068,152653642,152655926,152656937,152664257,152666660,152706391,152707507,152723625,152840565, chr1 153302455 153305763 153304378 61.456 28601 intragenic intron no-response 1.00010457 -935 1190005F20Rik chr1:153275777-153305313;153275777,153280923,153282857,153286645,153287935,153289716,153290376,153295383,153297029,153299177,153300206,153301014,153302107,153304592,153304811,-153276232,153281034,153282971,153286710,153288065,153289840,153290456,153295627,153297242,153299368,153300285,153301181,153302170,153304719,153305313, chr1 133950420 133955071 133951138 60.097 13501 intragenic intron no-response 0.967262256 -17779 Mfsd4 chr1:133933359-133964639;133933359,133937116,133938434,133942882,133948956,133950125,133950635,133954292,133955736,133964239,-133935550,133937237,133938505,133943030,133949130,133950241,133950801,133954544,133955935,133964639, chr1 71049725 71052248 71050410 58.989 99136 intergenic NA down-regulated 2.23 23698 Bard1 chr1:71074108-71149546;71074108,71077932,71093251,71094213,71100186,71112052,71113681,71121116,71134682,71136044,71149241,-71077426,71078030,71093344,71094346,71100295,71112225,71113762,71122054,71134825,71136101,71149546, chr1 59432545 59435438 59434466 58.725 -104524 intergenic NA NA 1 -109333 Fzd7 chr1:59538990-59543799;59538990,-59543799, chr1 181480625 181483262 181481634 58.126 4975 intragenic f_intron NA 1 -75970 Cnst chr1:181476659-181557604;181476659,181509468,181522815,181531832,181534649,181535083,181536378,181536567,181539916,181552897,181555129,-181476747,181509899,181522997,181531863,181534736,181535198,181536400,181536664,181540797,181553033,181557604, chr1 122345198 122346897 122346334 57.37 55327 intergenic NA no-response 0.999153017 24780 Marco chr1:122371114-122401661;122371114,122373130,122373942,122374428,122375920,122381201,122381350,122382265,122382408,122384723,122385108,122387489,122388608,122390196,122390620,122391317,122401245,-122371366,122373307,122373987,122374527,122375965,122381264,122381449,122382301,122382507,122384831,122385153,122387534,122388707,122390232,122390839,122391419,122401661, chr1 133649571 133653576 133651231 57.37 10633 intragenic intron NA 1 -15751 Slc26a9 chr1:133640598-133666982;133640598,133647156,133649420,133649696,133650403,133651948,133652765,133653213,133653964,133655047,133655335,133655974,133658282,133659332,133659491,133659721,133660370,133661563,133662460,133664385,133665777,-133640690,133647299,133649560,133649807,133650579,133652113,133652918,133653296,133654112,133655161,133655413,133656070,133658389,133659402,133659584,133659835,133660652,133661618,133662603,133664457,133666982,