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view test-data/stringtie_merge_out1.gtf @ 22:ed3da12f8c37 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stringtie commit 7dbb0fbe5446140f40fed36e45f42ec8d34bbc78
author iuc
date Fri, 03 May 2019 11:04:29 -0400
parents f4e465352f50
children 7506ac12fecb
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# stringtie --merge -p 1 -G /tmp/tmpcy98bsa4/files/000/dataset_40.dat -m 50 -c 0 -F 1.0 -T 1.0 -f 0.01 -g 250 -o /tmp/tmpcy98bsa4/files/000/dataset_41.dat /tmp/tmpcy98bsa4/files/000/dataset_36.dat /tmp/tmpcy98bsa4/files/000/dataset_37.dat /tmp/tmpcy98bsa4/files/000/dataset_38.dat /tmp/tmpcy98bsa4/files/000/dataset_39.dat
# StringTie version 1.3.6
test_chromosome	StringTie	transcript	53	550	1000	+	.	gene_id "MSTRG.1"; transcript_id "CUFF.1.1"; ref_gene_id "CUFF.1"; 
test_chromosome	StringTie	exon	53	250	1000	+	.	gene_id "MSTRG.1"; transcript_id "CUFF.1.1"; exon_number "1"; ref_gene_id "CUFF.1"; 
test_chromosome	StringTie	exon	351	400	1000	+	.	gene_id "MSTRG.1"; transcript_id "CUFF.1.1"; exon_number "2"; ref_gene_id "CUFF.1"; 
test_chromosome	StringTie	exon	501	550	1000	+	.	gene_id "MSTRG.1"; transcript_id "CUFF.1.1"; exon_number "3"; ref_gene_id "CUFF.1";