diff test-data/stringtie_out12.gtf @ 27:95d141564e5d draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stringtie commit 8923485156dc1150213ad1f324aa16aaef4ae643
author iuc
date Mon, 31 Oct 2022 20:07:17 +0000
parents d8424a4f39ed
children 9b48a7386627
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line diff
--- a/test-data/stringtie_out12.gtf	Wed Jul 27 09:27:31 2022 +0000
+++ b/test-data/stringtie_out12.gtf	Mon Oct 31 20:07:17 2022 +0000
@@ -1,5 +1,5 @@
-# StringTie version 2\.1\.7
-# stringtie short_sorted\.sam long_sorted\.sam -E 25 -o /[/.\-_A-Za-z0-9]+\.dat -p 2 -f 0\.15 -m 200 -a 10 -j 1 -c 2 -g 50 -M 0\.95
+# StringTie version 2\.2\.1
+# stringtie /[-_/a-zA-Z0-9]+\.dat /[-_/a-zA-Z0-9]+\.dat -E 25 -o /[-_/a-zA-Z0-9]+\.dat -p [0-9]+ -f 0\.15 -m 200 -a 10 -j 1 -c 2 -g 50 -M 0\.95
 chr16\tStringTie\texon\t784986\t786377\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "1"; cov "33\.698273";
 chr16\tStringTie\texon\t786827\t786928\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "2"; cov "24\.970589";
 chr16\tStringTie\texon\t787077\t787179\t1000\t-\t\.\tgene_id "STRG\.[0-9]+"; transcript_id "STRG\.[0-9]+\.[0-9+]"; exon_number "3"; cov "24\.747572";