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changeset 34:631494adb540 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tool_collections/snpeff commit 59e390b4c1fe212865131613b655fbeedf2ef119
author iuc
date Wed, 18 Mar 2026 12:08:21 +0000
parents 94653948fdb9
children
files snpEff_macros.xml
diffstat 1 files changed, 6 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/snpEff_macros.xml	Sat Oct 04 17:00:46 2025 +0000
+++ b/snpEff_macros.xml	Wed Mar 18 12:08:21 2026 +0000
@@ -1,17 +1,17 @@
 <macros>
   <!-- TOKENS TO BE UPDATED -->
-  <token name="@TOOL_VERSION@">5.2</token>
-  <token name="@VERSION_SUFFIX@">1</token>
-  <token name="@SNPEFF_VERSION@">SnpEff5.2</token>
+  <token name="@TOOL_VERSION@">5.4</token>
+  <token name="@VERSION_SUFFIX@">0</token>
+  <token name="@SNPEFF_VERSION@">SnpEff5.4</token>
   <!-- SnpEff versions are usually backwards compatible with a few older database versions.
   The authoritative place to look up the compatibility scheme is DATABASE_COMPATIBLE_VERSIONS in Config.java of the upstream code.
   Currently this would be:
   https://github.com/pcingola/SnpEff/blob/master/src/main/java/org/snpeff/snpEffect/Config.java#L37-L52
 
   The three following tokens define the list of compatible DB versions for the wrapper (for input validation), a human-readable string (for parameter help/labels) and a regex of the same versions (for filtering of data table records). -->
-  <token name="@COMPATIBLE_DB_VERSIONS@">['SnpEff5.0', 'SnpEff5.1', 'SnpEff5.2']</token>
-  <token name="@COMPATIBLE_DB_VERSIONS_STRING@">SnpEff 5.0 - 5.2</token>
-  <token name="@COMPATIBLE_DB_VERSIONS_REGEX@"><![CDATA[^SnpEff5\.[0-2]$]]></token>
+  <token name="@COMPATIBLE_DB_VERSIONS@">['SnpEff5.0', 'SnpEff5.1', 'SnpEff5.2', 'SnpEff5.3', 'SnpEff5.4']</token>
+  <token name="@COMPATIBLE_DB_VERSIONS_STRING@">SnpEff 5.0 - 5.4</token>
+  <token name="@COMPATIBLE_DB_VERSIONS_REGEX@"><![CDATA[^SnpEff5\.[0-4]$]]></token>
   <!-- End of TOKENS TO BE UPDATED -->
 
   <xml name="requirement">