Mercurial > repos > iuc > seqtk
changeset 8:d3b46dec1f5e draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqtk commit e5a5ad091c621348dc6ce2df861475ebc54a380e
| author | iuc |
|---|---|
| date | Tue, 13 Oct 2015 17:27:35 -0400 |
| parents | 55e75a28fde7 |
| children | f9305f8811b8 |
| files | seqtk_seq.xml |
| diffstat | 1 files changed, 3 insertions(+), 2 deletions(-) [+] |
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--- a/seqtk_seq.xml Mon May 04 22:47:23 2015 -0400 +++ b/seqtk_seq.xml Tue Oct 13 17:27:35 2015 -0400 @@ -26,7 +26,9 @@ $N $x1 $x2 -$V +#if $in_file.ext == "fastqillumina" + -V +#end if $in_file > $default]]></command> @@ -48,7 +50,6 @@ <param checked="false" label="drop sequences containing ambiguous bases" help="(-N)" name="N" type="boolean" falsevalue="" truevalue="-N"/> <param checked="false" label="output the 2n-1 reads only" help="(-1)" name="x1" type="boolean" falsevalue="" truevalue="-1"/> <param checked="false" label="output the 2n reads only" help="(-2)" name="x2" type="boolean" falsevalue="" truevalue="-2"/> - <param checked="false" label="shift quality by '(-Q) - 33' " help="(-V)" name="V" type="boolean" falsevalue="" truevalue="-V"/> </inputs> <outputs> <data format_source="in_file" hidden="false" name="default"/>